☆21Mar 14, 2026Updated last month
Alternatives and similar repositories for PlasmidGPT
Users that are interested in PlasmidGPT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated 8 months ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 4 years ago
- Benchmarking uncertainty quantification methods on proteins.☆21Jan 28, 2025Updated last year
- Benchmarking scripts for Gaia☆15Apr 10, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Code used to analyse and plot metadata of metagenomic binning tools☆14Aug 22, 2024Updated last year
- In-silico design pipeline for evaluating protein structure diffusion models.☆31Jun 25, 2024Updated last year
- Repo of AntiBMPNN project for antibody sequence design.☆41May 28, 2025Updated 11 months ago
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Dec 14, 2023Updated 2 years ago
- Building more accurate protein structures from backbone torsion angles☆15Mar 21, 2025Updated last year
- ☆18Mar 13, 2024Updated 2 years ago
- Tokenizing Loops of Antibodies☆34Nov 23, 2025Updated 5 months ago
- ☆16Dec 10, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated 9 months ago
- ☆38Dec 21, 2023Updated 2 years ago
- Scoring methods for predicting the DDG upon protein mutation☆16Feb 20, 2023Updated 3 years ago
- ☆11Mar 31, 2026Updated last month
- ☆16Mar 28, 2025Updated last year
- ☆20Sep 19, 2025Updated 7 months ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 2 years ago
- ☆74Feb 13, 2026Updated 2 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆80Mar 7, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python rich client for visual protein Sequence to Structure Analysis☆19Mar 31, 2026Updated last month
- Neurally-derived Potts models for protein design, inspired by dTERMen☆14Aug 23, 2022Updated 3 years ago
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 2 months ago
- PyPEF – Pythonic Protein Engineering Framework☆14Apr 26, 2026Updated last week
- ☆127Apr 4, 2026Updated 3 weeks ago
- ☆27Aug 8, 2025Updated 8 months ago
- ☆15Jun 11, 2021Updated 4 years ago
- 16S pipeline using qiime2 created with snakemake☆12Updated this week
- protein docking stuff☆52Apr 2, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- ☆47Sep 16, 2024Updated last year
- ☆86Feb 11, 2026Updated 2 months ago
- ☆31Dec 12, 2024Updated last year
- Metabolic scanning and annotation of Metagenomes☆10Dec 18, 2025Updated 4 months ago
- Protein design and variant prediction using autoregressive generative models☆120Jan 23, 2024Updated 2 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆21Apr 12, 2019Updated 7 years ago