alepandini / DyNoPy
DyNoPy
☆10Updated 2 months ago
Related projects ⓘ
Alternatives and complementary repositories for DyNoPy
- Code for deep learning guided design of dynamic proteins☆16Updated 3 months ago
- ☆43Updated 2 weeks ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆32Updated 2 months ago
- Generative diverse protein backbones by protein language model☆24Updated 3 months ago
- ☆14Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆33Updated 4 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆23Updated 3 months ago
- Some scripts that I keep using over and over.☆18Updated 7 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆25Updated 5 months ago
- ☆23Updated 3 weeks ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆24Updated 3 weeks ago
- ☆24Updated 3 months ago
- ☆17Updated 3 weeks ago
- ☆23Updated 3 weeks ago
- ☆38Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆25Updated last month
- Codes and scripts for "An artificial intelligence accelerated virtual screening platform for drug discovery"☆35Updated last month
- GUI for interactive graph-based analyses of hydrogen bond networks in crystal structures and MD trajectories.☆9Updated last year
- ☆20Updated last month
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆23Updated 11 months ago
- scripts to find PBD structures for cancer driver proteins☆29Updated 8 months ago
- ☆13Updated last year
- Binding pocket optimization based on force fields and docking scoring functions☆29Updated last week
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆24Updated last month
- ☆20Updated 4 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆29Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆37Updated 5 months ago
- ☆16Updated 2 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆26Updated this week