Alternatives and similar repositories for conformal-protein-retrieval

Users that are interested in conformal-protein-retrieval are comparing it to the libraries listed below

• Doudna-lab / GARNET_DL
  ☆36Updated 10 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 8 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆62Updated 2 years ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• AbSciBio / igdesign
  ☆47Updated 11 months ago
• zzhangzzhang / pLMs-interpretability
  ☆32Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 8 months ago
• liudan111 / PLM-interact
  PLM-interact: extending protein language models to predict protein-protein interactions.
  ☆51Updated 3 months ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆56Updated last year
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆72Updated last week
• csi-greifflab / developability_profiling
  ☆26Updated 3 months ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆76Updated last week
• SNU-CSSB / RF2-Lite
  ☆31Updated last year
• aaronkollasch / seqdesign-pytorch
  Protein design and variant prediction using autoregressive generative models
  ☆24Updated 2 years ago
• gwlilabmit / FragFold
  Fragment binding prediction with ColabFold
  ☆38Updated last month
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…
  ☆62Updated last month
• JudeWells / chainsaw
  ☆44Updated last year
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆39Updated last year
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆28Updated 9 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆33Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated last year
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 6 months ago
• TobiasHeOl / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆22Updated 9 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆48Updated 7 months ago
• lehner-lab / doubledeepms
  Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…
  ☆21Updated 2 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆35Updated 2 years ago
• PDB-REDO / AlphaBridge
  ☆47Updated last month
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆45Updated last year
• jsunn-y / DeCOIL
  A computational method to optimize degenerate codons for synthesizing an informed combinatorial mutagenesis protein variant library
  ☆16Updated 9 months ago