PacificBiosciences / HiFi-human-WGS-WDL
☆56Updated this week
Alternatives and similar repositories for HiFi-human-WGS-WDL:
Users that are interested in HiFi-human-WGS-WDL are comparing it to the libraries listed below
- Toolkit for calling structural variants using short or long reads☆101Updated last week
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated last month
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated last month
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆138Updated 10 months ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆67Updated 6 months ago
- Precision HLA typing from next-generation sequencing data☆64Updated last month
- Fast and accurate coordinate conversion between assemblies☆112Updated this week
- Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed …☆38Updated 2 weeks ago
- Tools for the analysis of structural variation in genomes☆78Updated last year
- Helper scripts for biological data processing from Sentieon☆64Updated 5 months ago
- Documenting usage and experience with bioinformatic tools☆41Updated 9 years ago
- WDL workflows for variant calling and assembly using ONT☆33Updated this week
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆45Updated this week
- ENCODE long read RNA-seq pipeline☆45Updated 2 years ago
- Data from the Human PanGenomics Project☆60Updated 3 years ago
- Long-read Isoform Quantification and Analysis☆39Updated this week
- ☆39Updated 11 months ago
- Somatic structural variant caller for long-read data☆62Updated 3 weeks ago
- GenMap - Fast and Exact Computation of Genome Mappability☆106Updated 9 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆89Updated 3 years ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆113Updated 3 months ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆55Updated 5 years ago
- Methylation Phasing for Nanopore Sequencing☆47Updated 2 years ago
- ClairS-TO - a deep-learning method for tumor-only somatic variant calling☆59Updated this week
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆53Updated 5 months ago
- R package designed to simplify structural variant analysis☆72Updated 3 years ago
- R Package for Non Invasive Prenatal Testing (NIPT) analysis☆41Updated 5 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆42Updated this week
- A tool for profiling long STRs from short reads☆96Updated 3 years ago