HKU-BAL / SENSVLinks
A tool to detect structural variant
☆17Updated 2 years ago
Alternatives and similar repositories for SENSV
Users that are interested in SENSV are comparing it to the libraries listed below
Sorting:
- ☆33Updated 3 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆46Updated 2 months ago
- Human pan-genome analysis pipeline☆31Updated 5 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 8 months ago
- MarginPolish: Graph based assembly polishing☆47Updated 4 years ago
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Updated last year
- Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data☆59Updated this week
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆23Updated 2 years ago
- Extract modifed base call information from Guppy Fast5 files.☆14Updated 3 years ago
- Tumour-only somatic mutation calling using long reads☆28Updated last year
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆17Updated 7 years ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆37Updated 6 months ago
- ☆49Updated last year
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆34Updated 3 months ago
- ☆23Updated 5 months ago
- VNTR annotation using motif selection☆38Updated 2 months ago
- A gene fusion caller for long-read transcriptome sequencing data.☆20Updated last year
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆38Updated last year
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- Method to optimally select samples for validation and resequencing☆29Updated 4 years ago
- Structural variant benchmark☆19Updated 8 months ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Updated 3 years ago
- ☆35Updated 9 months ago
- Sample Contamination Estimate from VCF☆21Updated last year
- Variant annotation and merging pipeline☆39Updated 3 months ago
- Structural Variants Pipeline for Long Reads☆44Updated 7 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆34Updated 2 years ago
- An insertion caller for Illumina paired-end WGS data.☆23Updated 2 months ago
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago