rvaser / raLinks
This repository is deprecated, please use the link to the right.
☆23Updated 6 years ago
Alternatives and similar repositories for ra
Users that are interested in ra are comparing it to the libraries listed below
Sorting:
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Find Unique genomic Regions☆30Updated 2 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap…☆13Updated 9 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last week
- genomic alignment similarity search tool☆18Updated last month
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- URMAP ultra-fast read mapper☆39Updated 5 years ago
- Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data☆20Updated 4 years ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 3 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 5 years ago
- Read nanopore sequence reads in real-time☆14Updated 8 years ago
- Visualising discordant reads☆15Updated 9 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 3 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 7 years ago
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- ☆26Updated 5 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 2 months ago
- Colinear block visualisation tool☆31Updated last year
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Updated last year
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 8 years ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 7 years ago
- Profile HMM-based hybrid error correction algorithm for long reads☆20Updated 6 years ago
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆27Updated 8 years ago
- An algorithm for centromere assembly using long error-prone reads☆26Updated 4 years ago