rvaser / raLinks
This repository is deprecated, please use the link to the right.
☆23Updated 6 years ago
Alternatives and similar repositories for ra
Users that are interested in ra are comparing it to the libraries listed below
Sorting:
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Find Unique genomic Regions☆29Updated 2 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 5 years ago
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- Colinear block visualisation tool☆31Updated last year
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆31Updated 7 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 5 years ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap…☆13Updated 9 years ago
- compare sequences to a shared root reference sequence.☆24Updated 3 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last year
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆28Updated 10 years ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated last month
- genomic alignment similarity search tool☆18Updated 3 weeks ago
- An algorithm for centromere assembly using long error-prone reads☆26Updated 4 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 5 years ago
- A script for comparing old vs new versions of genome annotations☆21Updated last year
- transposable element typing pipeline☆18Updated last year
- Compute N50/NG50 and auN/auNG☆32Updated last year
- ☆21Updated 5 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- Extract metagenome-assembled genomes (MAGs) from metagenomic data using Hi-C.☆23Updated last week
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- URMAP ultra-fast read mapper☆39Updated 4 years ago
- ☆20Updated last year
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago