mdozmorov / gwas2bedLinks
Extracting disease-specific genomic coordinates from GWAS catalog
☆21Updated 6 years ago
Alternatives and similar repositories for gwas2bed
Users that are interested in gwas2bed are comparing it to the libraries listed below
Sorting:
- ☆38Updated 5 years ago
- ☆44Updated 7 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- A flexible framework for nucleosome profiling of cell-free DNA☆28Updated 2 years ago
- Mutational signature analysis for low statistics SNV data☆64Updated last year
- Clinical interpretation of somatic mutations in cancer☆50Updated 10 months ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆28Updated 3 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆89Updated last month
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago
- ☆31Updated last year
- Phenome Exome Association and Correlation Of Key phenotypes☆31Updated 4 years ago
- A framework to infer mutational signatures in cancer over time☆56Updated 6 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 3 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Proteome-Wide Association Study☆50Updated 4 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆41Updated 3 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Big data Regression for predicting DNase I hypersensitivity☆31Updated last year
- An R package to time somatic mutations☆65Updated 5 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72Updated last year
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 11 months ago
- ☆74Updated 4 years ago
- ☆53Updated 3 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated 2 months ago
- Robust Allele Specific Quantification and quality controL☆40Updated 4 years ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆31Updated 2 years ago