NCBI-Hackathons / Network_SNPs
A framework for network analysis and display of SNPs
☆18Updated 8 years ago
Related projects ⓘ
Alternatives and complementary repositories for Network_SNPs
- Genetics training camp☆21Updated 4 years ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 4 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 5 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆21Updated 5 years ago
- Universal RObust Peak Annotator☆15Updated 11 months ago
- Software to help identify overlap between association scan results and GWAS hit catalogs.☆14Updated 2 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 5 months ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- ☆11Updated 7 years ago
- ☆12Updated 5 years ago
- Materials presented at the BiocNYC meet-up☆12Updated 5 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆30Updated 7 years ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 6 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 3 years ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...☆20Updated 7 years ago
- XEnograft Visualization & Analysis☆9Updated last year
- Easily run WDL workflows on GCP☆13Updated 3 years ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated 11 months ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- GWAS gold standards repository☆29Updated last year
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆12Updated 5 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 3 months ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Updated 6 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Updated 3 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Updated 8 years ago
- Subclonal Hierarchy Inference from Somatic Mutations☆21Updated 5 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last year
- Exploration, clustering, visualization and classification of DNA damage patterns☆18Updated 3 years ago