Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data
☆26May 15, 2024Updated 2 years ago
Alternatives and similar repositories for Genoppi
Users that are interested in Genoppi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.☆10Apr 9, 2019Updated 7 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- Code and data related to the meta-analysis of fat distribution in UK Biobank and GIANT☆23Dec 5, 2018Updated 7 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 3 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆20Nov 26, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆23Sep 1, 2022Updated 4 years ago
- Analyze exome data for Mendelian disorders. Still in alpha-testing.☆10Apr 13, 2016Updated 10 years ago
- SV☆15May 3, 2018Updated 8 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Approaches to identify Differential Rhythmicity☆11Oct 12, 2026Updated 3 weeks ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Scripts and Snakemake pipeline used in the EMBL-ABR webinar☆13Jul 24, 2019Updated 7 years ago
- GWAS for survival analysis in large cohorts☆26Jul 24, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 7 months ago
- Interactive visualization of highdensity SNP, QTL, GWAS and gene data.☆10Oct 5, 2023Updated 3 years ago
- SMTpred is a program which combines SNP effects or individual scores from multiple traits according to their sample size, SNP-heritabilit…☆16May 25, 2017Updated 9 years ago
- genetic distance plotting for recombination events analysis☆10Jul 14, 2026Updated 3 months ago
- Tools for doing x way meta-analysis☆18Oct 15, 2026Updated 3 weeks ago
- Pariwise analysis of GWAS☆48Sep 27, 2018Updated 8 years ago
- ☆10Jul 2, 2024Updated 2 years ago
- mist R package files☆10Jul 15, 2026Updated 3 months ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11May 5, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 11 years ago
- Multi-Trait Genome-Wide Association Analysis☆21Dec 19, 2023Updated 2 years ago
- This is the web resource for NTU's Bio-Data Science and Education Laboratory☆14Aug 5, 2026Updated 3 months ago
- Cytofin-an R package for CyTOF data integration☆12Jan 13, 2022Updated 4 years ago
- ☆12Jun 17, 2021Updated 5 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- An R package containing helper functions for Stan☆17Dec 13, 2021Updated 4 years ago
- Cyclic Ordering by Periodic Structure☆15Oct 8, 2019Updated 7 years ago
- ☆22Apr 2, 2015Updated 11 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package for generating comparative regional association plots☆17Sep 30, 2025Updated last year
- An S3 data object and framework for common quantitative proteomic analyses☆47Oct 22, 2026Updated 2 weeks ago
- ☆13Mar 1, 2025Updated last year
- A framework for network analysis and display of SNPs☆20Oct 31, 2016Updated 10 years ago
- Differential Expression Analysis tool box R lang package for omics data☆48Updated this week
- A curated list of awesome clonality and tumor heterogeneity resources☆16Jun 25, 2019Updated 7 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆48Apr 2, 2026Updated 7 months ago