Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data
☆26May 15, 2024Updated 2 years ago
Alternatives and similar repositories for Genoppi
Users that are interested in Genoppi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.☆10Apr 9, 2019Updated 7 years ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆20Nov 26, 2023Updated 2 years ago
- SV☆15May 3, 2018Updated 8 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Scripts and Snakemake pipeline used in the EMBL-ABR webinar☆13Jul 24, 2019Updated 6 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- SMTpred is a program which combines SNP effects or individual scores from multiple traits according to their sample size, SNP-heritabilit…☆15May 25, 2017Updated 9 years ago
- Code and data related to the meta-analysis of fat distribution in UK Biobank and GIANT☆22Dec 5, 2018Updated 7 years ago
- RIblast is ultrafast RNA-RNA interaction prediction software based on seed-and-extension algorithm for comprehensive lncRNA interactome a…☆18May 9, 2023Updated 3 years ago
- ☆14Dec 7, 2021Updated 4 years ago
- genetic distance plotting for recombination events analysis☆10Feb 25, 2026Updated 3 months ago
- ☆10Jul 2, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆23Sep 1, 2022Updated 3 years ago
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆11Jun 24, 2015Updated 10 years ago
- Cytofin-an R package for CyTOF data integration☆12Jan 13, 2022Updated 4 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11May 5, 2020Updated 6 years ago
- Pariwise analysis of GWAS☆47Sep 27, 2018Updated 7 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆21May 27, 2021Updated 5 years ago
- ☆17Apr 3, 2026Updated 2 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 8 years ago
- ☆13Jun 17, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆16Feb 23, 2021Updated 5 years ago
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- GWAS Summary Statistics for Brain Imaging Phenotypes☆21Sep 6, 2021Updated 4 years ago
- This is the web resource for NTU's Bio-Data Science and Education Laboratory☆13Apr 29, 2026Updated last month
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 2 years ago
- Phylogenetic profiling with orthology data☆13May 11, 2026Updated last month
- ☆12Mar 1, 2025Updated last year
- A curated list of awesome clonality and tumor heterogeneity resources☆15Jun 25, 2019Updated 6 years ago
- Public repository for building and analyzing protein complex maps☆12Dec 6, 2016Updated 9 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 2 months ago
- Topics in biology that are not researched as much as they should be☆17Sep 14, 2020Updated 5 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆46Apr 2, 2026Updated 2 months ago
- Minimal genome browser library created with TnT☆19Nov 22, 2017Updated 8 years ago
- ☆37Mar 31, 2026Updated 2 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Dec 15, 2025Updated 5 months ago
- CRISPR, faster, better – The Crackling method for whole-genome target detection☆11Jan 11, 2024Updated 2 years ago