cBioPortal / mutation-mapper
☆13Updated 4 years ago
Alternatives and similar repositories for mutation-mapper:
Users that are interested in mutation-mapper are comparing it to the libraries listed below
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Library for manipulating genomic variants and predicting their effects☆82Updated 6 months ago
- iCount, protein-RNA interaction analytics☆23Updated 3 years ago
- OLD REPOSITORY - Go to☆32Updated 6 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆41Updated 8 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 8 months ago
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆60Updated 2 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆43Updated 2 years ago
- Kourami: Graph-guided assembly for HLA alleles☆36Updated 5 years ago
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆30Updated 4 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆75Updated last month
- Efficient handling of FASTQ files from Python☆50Updated 4 months ago
- Galaxy RNA workbench☆39Updated 4 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 8 months ago
- Python package to analyze DNA methylation data☆39Updated 2 months ago
- Position-wise analysis of sequencing and genomics data☆38Updated last year
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆42Updated 4 months ago
- ☆18Updated 2 years ago
- Package to Score Sequences using Rule Set 3☆11Updated 10 months ago
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆39Updated 4 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆49Updated 5 years ago
- Parse Illumina sample sheets with Python☆50Updated 9 months ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Updated 6 years ago
- Exon-exon splice junctions across SRA☆39Updated 3 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆65Updated 4 years ago
- small rna-seq analysis package☆29Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆46Updated last year
- Python package to annotate and visualize gene fusions.☆61Updated 3 months ago
- 3D hotspot mutation proximity analysis tool☆46Updated last year