cBioPortal / mutation-mapperLinks
☆13Updated 5 years ago
Alternatives and similar repositories for mutation-mapper
Users that are interested in mutation-mapper are comparing it to the libraries listed below
Sorting:
- python access to UCSC genomes database☆136Updated 5 years ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆88Updated last month
- MyGene.info: A BioThings API for gene annotations☆129Updated 2 months ago
- A needle plot for mutation data☆27Updated 8 years ago
- Simple FASTQ quality assessment using Python☆108Updated 4 years ago
- http://bam.iobio.io☆47Updated last year
- Platypus Variant Caller☆108Updated last year
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Updated 5 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago
- Pure-python implementation of UCSC liftOver genome coordinate conversion☆99Updated last year
- OLD REPOSITORY - Go to☆31Updated 7 years ago
- UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline☆41Updated 5 years ago
- ☆69Updated 3 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 6 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆33Updated last week
- Kourami: Graph-guided assembly for HLA alleles☆38Updated 6 years ago
- ☆63Updated 9 years ago
- DEPRECATED. This tool has been superseded by https://github.com/griffithlab/pVACtools☆61Updated 6 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample☆26Updated 2 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.☆41Updated last week
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 3 months ago
- integrated RNA-seq Analysis Pipeline☆84Updated 6 years ago
- All source code of the crispor.org website☆83Updated 2 months ago
- ☆83Updated 3 years ago
- Galaxy RNA workbench☆40Updated 5 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago