MicrosoftResearch / Azimuth
Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency
☆233Updated 4 years ago
Alternatives and similar repositories for Azimuth:
Users that are interested in Azimuth are comparing it to the libraries listed below
- Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data☆135Updated 5 years ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆259Updated last year
- Convolutional neural network analysis for predicting DNA sequence activity.☆258Updated 4 years ago
- Model zoo for genomics☆166Updated 6 months ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆292Updated last month
- DNA plotting library for Python☆292Updated 11 months ago
- End-to-end guide design for CRISPR/Cas9 with machine learning☆130Updated last year
- Deep neural networks for predicting CpG methylation☆143Updated 5 years ago
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆159Updated 8 years ago
- a framework for training sequence-level deep learning networks☆378Updated 2 months ago
- dna2vec: Consistent vector representations of variable-length k-mers☆183Updated 2 years ago
- Sequential regulatory activity predictions with deep convolutional neural networks.☆424Updated 8 months ago
- DCell browser and gene deletion simulator☆122Updated 2 years ago
- ☆59Updated 2 years ago
- Kipoi's model zoo API☆235Updated 9 months ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61Updated 8 years ago
- deep residual neural network for classifying the pathogenicity of missense mutations.☆114Updated 3 years ago
- WebLogo 3: Sequence Logos redrawn☆149Updated last month
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆388Updated 8 months ago
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆173Updated this week
- Deep learning infrastructure for genomics☆256Updated 3 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago
- For anyone who are eager to applying deep learning in bioinformatics!☆122Updated 6 years ago
- List of software/websites/databases/other stuff for genome engineering☆510Updated 8 months ago
- Deep learning for gene expression inference☆147Updated 6 years ago
- TF MOtif Discovery from Importance SCOres☆133Updated last year
- ☆107Updated 6 years ago
- A Python framework for structural systems biology☆107Updated 4 years ago
- Jupyter notebook based genomic data visualization toolkit.☆232Updated last week
- Unified biological sequence manipulation in Python☆208Updated 8 months ago