MoriarityLab / EditR
EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence
☆32Updated last year
Alternatives and similar repositories for EditR:
Users that are interested in EditR are comparing it to the libraries listed below
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆21Updated last month
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆56Updated last year
- Variant catalogue pipeline☆25Updated this week
- Pair-End AssembeR☆29Updated 10 years ago
- pathway based data integration and visualization☆40Updated 10 months ago
- visual analysis of your VCF files☆30Updated 2 years ago
- ☆30Updated 4 years ago
- Parse GFF3 into Pandas dataframes☆26Updated 11 months ago
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆23Updated 2 years ago
- Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)☆14Updated 4 months ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆51Updated this week
- Making bioinformatics fun again☆63Updated 8 months ago
- A Python module to analyze Sanger sequencing results.☆22Updated last year
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆48Updated 5 years ago
- Sphinx documentation source for a computational genomics tutorial.☆33Updated 4 years ago
- A simple add-in for Excel supplying functions to calculate the reverse, complement, and reverse-complement of a nucleotide sequence☆44Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 8 months ago
- BEAVR: A Browser-based tool for the Exploration And Visualization of RNAseq data☆25Updated 3 years ago
- A guide to running MaxQuant in Linux☆32Updated 4 years ago
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆36Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆23Updated last year
- gatk4 RNA variant calling pipeline☆41Updated this week
- Protein Alignment and Detection Interface☆61Updated 9 months ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆26Updated 11 months ago
- A list of alternative splicing analysis resources☆41Updated 2 months ago
- ☆21Updated 6 years ago
- A curated list of awesome curated lists of awesome softwares and resources in bioinformatics and affiliated areas☆39Updated 3 months ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated 10 months ago
- Snakemake wrappers for bioinformatics.☆18Updated last year