EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence
☆33Sep 1, 2023Updated 2 years ago
Alternatives and similar repositories for EditR
Users that are interested in EditR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated this week
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated 3 weeks ago
- This tool designs guides for use with the base editor technology.☆13Aug 11, 2023Updated 2 years ago
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆30Jul 28, 2022Updated 3 years ago
- ☆10Jul 10, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Collection of R packages that work in harmony for CRISPR gRNA design☆15Nov 21, 2025Updated 8 months ago
- HIVdb webservice client☆13Jan 22, 2026Updated 6 months ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- Co-expression network management based on WGCNA + k-means☆22May 11, 2021Updated 5 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- Synthego ICE - Inference of CRISPR Editing software☆71Apr 13, 2026Updated 3 months ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Sep 2, 2025Updated 10 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆105Aug 31, 2022Updated 3 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆40Nov 17, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- GEO RNA-seq Experiments Processing Pipeline☆22Oct 25, 2019Updated 6 years ago
- Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products☆37Updated this week
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated 2 years ago
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Oct 26, 2021Updated 4 years ago
- Webserver and command line tool for annotating engineered plasmids☆146Jul 6, 2026Updated 2 weeks ago
- Modelling insertion efficiency for Prime Insertion Experiments☆13Apr 1, 2024Updated 2 years ago
- A local tool for high-throughput CRISPR single-guide RNA (sgRNA) design in plants.☆18Oct 14, 2024Updated last year
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago
- analysis pipeline for CODEC data☆13Apr 22, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- Link rstudio.cloud and GitHub☆11Oct 30, 2021Updated 4 years ago
- Scripts for analyzing PacBio AAV sequences☆15May 3, 2024Updated 2 years ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆350Jun 12, 2026Updated last month
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆11Feb 10, 2024Updated 2 years ago
- Anno is a variant annotation tool☆24May 18, 2016Updated 10 years ago
- ☆42Dec 15, 2025Updated 7 months ago
- Webserver and command line tool for annotating engineered plasmids☆17May 19, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Boston Consulting Group Data Science & Advanced Analytics Virtual Experience Program☆11Dec 27, 2020Updated 5 years ago
- A simple add-in for Excel supplying functions to calculate the reverse, complement, and reverse-complement of a nucleotide sequence☆46Aug 25, 2022Updated 3 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Mar 7, 2022Updated 4 years ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆33Jul 10, 2026Updated last week
- All source code of the crispor.org website☆90Updated this week
- List of software/websites/databases/other stuff for genome engineering☆576Updated this week
- A template website for presenting your reproducible website☆16Apr 12, 2023Updated 3 years ago