☆75Feb 13, 2023Updated 3 years ago
Alternatives and similar repositories for DeepCRISPR
Users that are interested in DeepCRISPR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆103Aug 31, 2022Updated 3 years ago
- ☆58Sep 27, 2021Updated 4 years ago
- CRISPR NGS data analysis and visualization pipeline☆16Jul 26, 2019Updated 6 years ago
- Machine learning for accurate identification and classification of CRISPR-Cas systems☆23Dec 20, 2024Updated last year
- A software for the multispecies design of CRISPR/Cas9 libraries☆37Oct 7, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- A local tool for high-throughput CRISPR single-guide RNA (sgRNA) design in plants.☆17Oct 14, 2024Updated last year
- End-to-end guide design for CRISPR/Cas9 with machine learning☆139Jun 12, 2023Updated 3 years ago
- ☆13Jul 23, 2020Updated 5 years ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆350Jun 12, 2026Updated 2 weeks ago
- Data analysis scripts for Datlinger et. al, 2017 (doi:10.1038/nmeth.4177)☆33Feb 22, 2018Updated 8 years ago
- Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data☆142May 17, 2019Updated 7 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆31Jun 6, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Jun 17, 2026Updated 2 weeks ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Jun 25, 2026Updated last week
- CRISPR discovery pipeline☆33Nov 2, 2018Updated 7 years ago
- Scripts for processing and predicting CRISPR/Cas9-generated mutations☆28Feb 25, 2023Updated 3 years ago
- CNN-SVR: A deep learning approach for predicting CRISPR/Cas9 guide RNA on-target activity☆24Apr 25, 2021Updated 5 years ago
- Source codes and examples for DeepPrime☆14Dec 17, 2024Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆37Nov 17, 2025Updated 7 months ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆28Apr 2, 2026Updated 3 months ago
- ☆13Jan 29, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Jul 27, 2016Updated 9 years ago
- dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go…☆13Mar 26, 2018Updated 8 years ago
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- ☆19Mar 21, 2024Updated 2 years ago
- SPROUT is a machine learning tool to predict the DNA repair outcome in CRISPR experiments.☆15Jul 17, 2021Updated 4 years ago
- A deep learning method for sgRNA off-target propensity prediction.☆16Mar 17, 2020Updated 6 years ago
- ☆14May 30, 2021Updated 5 years ago
- FlashFry: The rapid CRISPR target site characterization tool☆82Jun 12, 2024Updated 2 years ago
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.☆14Oct 18, 2021Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- DTI prediction method☆24Jan 22, 2024Updated 2 years ago
- Analysis pipeline for the GUIDE-seq assay.☆82Jun 14, 2023Updated 3 years ago
- The CRISPR assembler☆35May 13, 2021Updated 5 years ago
- ☆16Jun 21, 2018Updated 8 years ago
- Package to Score Sequences using Rule Set 3☆16Nov 10, 2025Updated 7 months ago
- A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences☆102Jul 11, 2023Updated 2 years ago
- Compressed Graph Representation for Scalable Molecular Graph Generation☆11Sep 24, 2020Updated 5 years ago