☆38Oct 25, 2018Updated 7 years ago
Alternatives and similar repositories for CRISPRiaDesign
Users that are interested in CRISPRiaDesign are comparing it to the libraries listed below
Sorting:
- ☆71Aug 19, 2023Updated 2 years ago
- C++ package for analysing CRISPR off targets☆21Apr 26, 2021Updated 4 years ago
- Exploratory data analysis for pooled CRISPR/Cas9 screens☆21Mar 6, 2017Updated 9 years ago
- R package that allows easily performing a complete Hi-C data analysis through a Graphical User Interface☆16Jan 26, 2021Updated 5 years ago
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 6 years ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆36Oct 7, 2022Updated 3 years ago
- All source code of the crispor.org website☆87Updated this week
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆12Aug 5, 2020Updated 5 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆96Aug 31, 2022Updated 3 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Jul 27, 2016Updated 9 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆32Aug 1, 2024Updated last year
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆11Jul 11, 2024Updated last year
- Using our experimental screening dataset, we trained machine learning models to predict sgRNA activity.☆13Oct 16, 2018Updated 7 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Sep 30, 2024Updated last year
- Analysis pipeline for the GUIDE-seq assay.☆81Jun 14, 2023Updated 2 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆239Jul 8, 2020Updated 5 years ago
- ☆16Mar 16, 2017Updated 8 years ago
- Peak calling for 4C data☆13May 4, 2018Updated 7 years ago
- Acquiring images from allen brain atlas, mouse ISH experiments in R.☆17Mar 20, 2024Updated last year
- A Perl/R pipeline for plotting metagenes☆37Sep 17, 2021Updated 4 years ago
- "Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy☆34Jan 7, 2020Updated 6 years ago
- Linear Models for Microarray Data☆12Apr 2, 2014Updated 11 years ago
- HiCDCPlus☆19Jun 6, 2022Updated 3 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37May 18, 2022Updated 3 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆22May 25, 2021Updated 4 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆21Feb 21, 2025Updated last year
- Repository for supplemental material of manuscripts☆19Jun 30, 2021Updated 4 years ago
- Get, parse, and extract information from the SRA metadata files☆46Sep 20, 2022Updated 3 years ago
- scType rewritten in python☆25Nov 7, 2024Updated last year
- A web app for exploratory data analysis of high-throughput screens (HTS)☆17Sep 19, 2018Updated 7 years ago
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆16Jul 15, 2015Updated 10 years ago
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 11 years ago
- R package for analysing proteomics data☆50Apr 17, 2023Updated 2 years ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Oct 20, 2020Updated 5 years ago
- A new workflow for the custom design of CRISPR libraries.☆21Nov 22, 2022Updated 3 years ago
- MetNormalizer is used to normalize large scale metabolomics data.☆22Mar 3, 2021Updated 5 years ago
- Builds a PEP from SRA or GEO accessions☆55Updated this week
- Chromatin segmentation in R☆19Feb 4, 2018Updated 8 years ago
- integrated RNA-seq Analysis Pipeline☆84Feb 6, 2019Updated 7 years ago