microsoft / Elevation
End-to-end guide design for CRISPR/Cas9 with machine learning
☆131Updated last year
Alternatives and similar repositories for Elevation:
Users that are interested in Elevation are comparing it to the libraries listed below
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆233Updated 4 years ago
- Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data☆135Updated 5 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆31Updated 7 years ago
- Model zoo for genomics☆166Updated 8 months ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆259Updated last year
- ☆151Updated 5 years ago
- a framework for training sequence-level deep learning networks☆378Updated 3 months ago
- Training and testing of DeepSEA models.☆14Updated 9 years ago
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆159Updated 8 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Updated 5 years ago
- Deep neural networks for predicting CpG methylation☆144Updated 5 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61Updated 8 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 5 years ago
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Updated 7 years ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 5 years ago
- Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning app…☆169Updated 2 years ago
- Kipoi's model zoo API☆235Updated 10 months ago
- Deep learning for gene expression inference☆146Updated 6 years ago
- DCNet — Denoising (DNA) Sequence With a LSTM-RNN and PyTorch & Neural DBG☆69Updated 6 years ago
- Deep learning infrastructure for genomics☆258Updated 3 years ago
- Perform hyper-parameter tuning, training, testing and prediction with Keras☆44Updated 6 years ago
- Ten Quick Tips for Deep Learning in Biology☆227Updated 3 years ago
- https://moalquraishi.wordpress.com/2018/12/09/alphafold-casp13-what-just-happened/☆50Updated 6 years ago
- Lists open source machine learning projects solving genomic or molecular biology problems.☆29Updated 7 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆62Updated 4 years ago
- Deep learning based alignment-free method for protein family modeling and prediction☆16Updated 6 years ago
- dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go…☆13Updated 7 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆81Updated 6 months ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆23Updated 2 years ago
- Flexible Integration of Data with Deep LEarning☆50Updated 2 years ago