rraadd88 / beditor
A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more
☆19Updated 11 months ago
Alternatives and similar repositories for beditor:
Users that are interested in beditor are comparing it to the libraries listed below
- Tool package to perform in-silico CRISPR analysis and assessment☆25Updated last year
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- ☆15Updated 2 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 11 months ago
- ☆16Updated last year
- ☆38Updated 7 months ago
- Long read to rMATS☆31Updated 2 years ago
- alternative splicing analysis pipeline☆19Updated 4 years ago
- BAGEL software☆27Updated last year
- A script to make downloading of SRA/GEO data easier☆30Updated last year
- Versatile FASTA/FASTQ demultiplexer.☆33Updated 11 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 2 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 8 months ago
- ☆35Updated 2 years ago
- k-mer probability logo☆11Updated 2 years ago
- Ultra-fast 5' and 3' demultiplexer☆27Updated last year
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- ChIP-seq DC and QC Pipeline☆34Updated 4 years ago
- ☆23Updated 3 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆36Updated last month
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆42Updated 3 months ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆26Updated last year
- Processing and plotting tools for genomics data☆20Updated last week
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- A python package and a set of shell commands to handle GTF files☆48Updated 10 months ago
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆32Updated 4 months ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated 2 weeks ago
- Comprehensive and scalable differential splicing analyses☆17Updated last month
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- Gene Fusion Visualiser☆51Updated 2 years ago