A software tool for personalized and allele-specific CRISPR editing.
☆18Feb 1, 2022Updated 4 years ago
Alternatives and similar repositories for AlleleAnalyzer
Users that are interested in AlleleAnalyzer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SPROUT is a machine learning tool to predict the DNA repair outcome in CRISPR experiments.☆15Jul 17, 2021Updated 4 years ago
- ☆13Sep 17, 2021Updated 4 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Sep 9, 2025Updated 7 months ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆32Mar 21, 2019Updated 7 years ago
- ☆26Oct 15, 2020Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A simple neural network for calling het-/hom-variants from alignments of single molecule reads to a reference☆60Apr 27, 2018Updated 8 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆239Jul 8, 2020Updated 5 years ago
- Collection of code for the GESTALT fate mapping paper using the CRISPR/Cas9 system☆24Jan 8, 2018Updated 8 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19May 26, 2024Updated last year
- Using our experimental screening dataset, we trained machine learning models to predict sgRNA activity.☆13Oct 16, 2018Updated 7 years ago
- Reproducible GSEA Benchmarking☆14Apr 29, 2026Updated last week
- A comprehensive gene set function enrichment tool for multiple species.☆14Mar 23, 2020Updated 6 years ago
- A new workflow for the custom design of CRISPR libraries.☆21Nov 22, 2022Updated 3 years ago
- ☆12Apr 16, 2026Updated 2 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Models, design algorithms, and other software related to Salis lab publications☆37Nov 6, 2024Updated last year
- ☆17Feb 5, 2026Updated 3 months ago
- ☆16Oct 10, 2023Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆36Nov 17, 2025Updated 5 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆100Aug 31, 2022Updated 3 years ago
- Code for the paper "Learning to engineer protein flexibility".☆23Mar 24, 2026Updated last month
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Jan 21, 2022Updated 4 years ago
- C++ package for analysing CRISPR off targets☆21Apr 26, 2021Updated 5 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆16Dec 28, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆22May 8, 2017Updated 8 years ago
- A local tool for high-throughput CRISPR single-guide RNA (sgRNA) design in plants.☆17Oct 14, 2024Updated last year
- This repo is mainly for beginners to intermediate level ML/Bioiniformatics engineers/students/enthusiasts. It mainly focus on creating a …☆15Dec 28, 2024Updated last year
- Synthego ICE - Inference of CRISPR Editing software☆69Apr 13, 2026Updated 3 weeks ago
- VCF (variant call format) parser☆26Apr 27, 2026Updated last week
- create word cloud using the abstract from PubMed☆22Feb 28, 2019Updated 7 years ago
- ThermoAlign: software for automated primer design☆27Apr 14, 2018Updated 8 years ago
- VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupy…☆39Apr 29, 2026Updated last week
- Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data☆141May 17, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts for creating a Kraken database from the Comprehensive Antibiotic Resistance Database☆10Dec 16, 2016Updated 9 years ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆11Nov 7, 2024Updated last year
- Code to reproduce analyses from the sleuth paper☆16Nov 20, 2018Updated 7 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.☆22Feb 10, 2019Updated 7 years ago
- Python toolkit and package for analyzing enzyme activity data☆10Jun 17, 2022Updated 3 years ago
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 5 years ago