keoughkath / AlleleAnalyzerLinks
A software tool for personalized and allele-specific CRISPR editing.
☆18Updated 3 years ago
Alternatives and similar repositories for AlleleAnalyzer
Users that are interested in AlleleAnalyzer are comparing it to the libraries listed below
Sorting:
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆32Updated 2 weeks ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Workflow management with Nextflow and nf-core☆25Updated 8 months ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 8 months ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆32Updated 2 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Find common blocks and differences between DNA sequences☆42Updated 6 months ago
- A collection of useful functions for bioinformatics data analysis☆25Updated 2 months ago
- visual analysis of your VCF files☆36Updated 2 years ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆23Updated 2 months ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Updated 2 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 2 months ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- R tool to analyse and integrate multiple -omics data☆14Updated 4 months ago
- POSTRE: Prediction Of STRuctural variant Effects☆28Updated 7 months ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated last month
- The Zavolab Automated RNA-seq Pipeline☆35Updated 2 months ago
- A comprehensive gene set function enrichment tool for multiple species.☆14Updated 5 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants☆46Updated 8 years ago
- NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly☆50Updated 5 years ago
- Portable WDL workflows for IDseq production pipelines☆32Updated 3 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated this week
- Python package to annotate and visualize gene fusions.☆64Updated last year
- Learning resources originally for a class held December 2020 "Dry bench skills for Researchers". Expanding based upon mini-courses.☆11Updated 3 years ago
- alternative splicing analysis pipeline☆20Updated 4 years ago