maximilianh / crisporWebsiteLinks
All source code of the crispor.org website
☆82Updated last month
Alternatives and similar repositories for crisporWebsite
Users that are interested in crisporWebsite are comparing it to the libraries listed below
Sorting:
- FlashFry: The rapid CRISPR target site characterization tool☆78Updated last year
- Analysis pipeline for the GUIDE-seq assay.☆80Updated 2 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆94Updated 3 years ago
- CrossMap is a python program to lift over genome coordinates from one genome version to another.☆88Updated 4 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆97Updated last month
- A small-RNA sequencing analysis pipeline☆94Updated 4 months ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆106Updated 4 months ago
- Module for embedding igv.js in an IPython notebook☆79Updated 8 months ago
- A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA☆107Updated 2 months ago
- Extract 3D contacts (.pairs) from sequencing alignments☆116Updated last week
- Genomic Interactive Visualization Engine☆145Updated 2 years ago
- Microsatellite Instability (MSI) detection using high-throughput sequencing data.☆113Updated 6 months ago
- A (mostly) universal methylation extractor for BS-seq experiments.☆172Updated last year
- Match up paired end fastq files quickly and efficiently.☆152Updated last year
- Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.☆132Updated last year
- Pangolin is a deep-learning method for predicting splice site strengths.☆81Updated last year
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆194Updated 3 weeks ago
- Simple FASTQ quality assessment using Python☆108Updated 4 years ago
- FEELnc : FlExible Extraction of LncRNA☆90Updated 3 months ago
- Check strandedness of RNA-Seq fastq files☆127Updated 3 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆55Updated 8 months ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- HiC uniform processing pipeline☆61Updated last year
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆67Updated last week
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆87Updated last week
- Publication quality NGS track plotting☆114Updated 3 weeks ago
- Tip and tricks for BAM files☆86Updated 7 years ago
- Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed in…☆121Updated 3 weeks ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆89Updated last week
- Pure-python implementation of UCSC liftOver genome coordinate conversion☆99Updated last year