maximilianh / crisporWebsite
All source code of the crispor.org website
☆75Updated 4 months ago
Alternatives and similar repositories for crisporWebsite:
Users that are interested in crisporWebsite are comparing it to the libraries listed below
- Analysis pipeline for the GUIDE-seq assay.☆78Updated last year
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆101Updated 5 months ago
- Quantification of transposable element expression using RNA-seq☆68Updated last year
- Snakemake pipelines for nanopore sequencing data archiving and processing☆90Updated 3 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 2 months ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆46Updated 2 years ago
- HiC uniform processing pipeline☆59Updated last year
- A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA☆105Updated 5 years ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆89Updated last month
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆91Updated 2 years ago
- FlashFry: The rapid CRISPR target site characterization tool☆73Updated 10 months ago
- Fast and flexible ORF finder☆69Updated 3 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 3 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆80Updated 5 months ago
- Discovering known and novel miRNAs from small RNA sequencing data☆147Updated 8 months ago
- FEELnc : FlExible Extraction of LncRNA☆87Updated 7 months ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆78Updated last week
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated last week
- Simple FASTQ quality assessment using Python☆108Updated 3 years ago
- Check strandedness of RNA-Seq fastq files☆123Updated 2 years ago
- Public repository for ShapeMapper 2 releases☆34Updated 5 months ago
- ☆91Updated 3 weeks ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆63Updated 9 months ago
- Analysis pipeline for the GUIDE-seq assay.☆24Updated last week
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆85Updated 3 months ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆54Updated 2 years ago
- Tip and tricks for BAM files☆85Updated 6 years ago
- Publication quality NGS track plotting☆111Updated 2 years ago
- Galaxy RNA workbench☆40Updated 4 years ago
- Extract 3D contacts (.pairs) from sequencing alignments☆112Updated 3 months ago