dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go with it for iterative CRISPR analysis over an exome.
☆13Mar 26, 2018Updated 8 years ago
Alternatives and similar repositories for dsNickFury3PlusOrchid
Users that are interested in dsNickFury3PlusOrchid are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- End-to-end guide design for CRISPR/Cas9 with machine learning☆140Jun 12, 2023Updated 3 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆242Jul 8, 2020Updated 6 years ago
- A command line tool for updating docstrings in Python files using the OpenAI API☆12Jan 10, 2023Updated 3 years ago
- Using our experimental screening dataset, we trained machine learning models to predict sgRNA activity.☆13Oct 16, 2018Updated 7 years ago
- Distributed Bayesian Optimization☆23Jun 29, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub☆25Mar 26, 2022Updated 4 years ago
- Metrics for evaluating biological sequence design☆16Updated this week
- Scripts for analyzing PacBio AAV sequences☆15May 3, 2024Updated 2 years ago
- Multi-threaded Distributed Memory Overlap-Layout-Consensus (OLC) Metagenome Assembler☆24Apr 10, 2019Updated 7 years ago
- Source codes and examples for DeepPrime☆15Dec 17, 2024Updated last year
- 使用指令微调对大模型进行微调。☆11Jun 28, 2023Updated 3 years ago
- This is a TIBIC RV project, dynamic active standby mechanism and multi thread message receiving and processing☆10Nov 5, 2024Updated last year
- Analyzes whole genome sequencing data for gene-editing verification☆13Aug 31, 2026Updated last week
- A Golang 3D Bin Packing Implementation☆33Jan 6, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- JAVA实现软件许可证书生成+验证☆18Feb 19, 2024Updated 2 years ago
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- Code associated with: AutoStepfinder: A fast and automated step detection method for single-molecule analysis Luuk Loeff, Jacob W J Kerss…☆13Jun 12, 2024Updated 2 years ago
- Notebooks for CPA figures☆15Dec 9, 2022Updated 3 years ago
- a guideRNA database generation tool☆21Mar 3, 2025Updated last year
- An interactive web application tool that enables big data visualization of the 136k+ UK Road Accidents reported during 2016.☆10Oct 19, 2022Updated 3 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆107Aug 31, 2022Updated 4 years ago
- ☆16Dec 21, 2022Updated 3 years ago
- MEDPlat brings the simplicity and power of low-code technologies to healthcare implementations. MEDplat is a point-of-care application th…☆17Feb 19, 2026Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Package to Score Sequences using Rule Set 3☆18Nov 10, 2025Updated 9 months ago
- Methods for estimating intrinsic dimension and methods for generating data on manifolds☆12May 23, 2019Updated 7 years ago
- The MorphoCut image processing pipeline library☆13Aug 11, 2025Updated last year
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- All design files and scripts necessary for the construction and use of the optoPlate-96☆11Apr 28, 2022Updated 4 years ago
- Calculate similarity with embedding☆11Jan 22, 2022Updated 4 years ago
- ☆17Oct 2, 2023Updated 2 years ago
- Tool for IDentification and Enumeration of Spliced and Unspliced Read Fragments☆19Aug 24, 2026Updated 2 weeks ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Jun 13, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An automated pipeline for processing DamID sequencing datasets☆16Aug 28, 2025Updated last year
- Python module to analyse CRISPR-based libraries☆16Apr 1, 2021Updated 5 years ago
- This repository contains FAQs (Frequently Asked Questions) for genome in a bottle project☆10Sep 28, 2018Updated 7 years ago
- Interpretation of proteomics identification results☆55Aug 1, 2026Updated last month
- Temporal Pathway Synthesizer☆17Jun 28, 2024Updated 2 years ago
- A no hassle tool for analyzing your favorite CRISPR screen dataset!☆11Apr 16, 2021Updated 5 years ago
- ☆14Jul 28, 2023Updated 3 years ago