Alternatives and similar repositories for dsNickFury3PlusOrchid

Users that are interested in dsNickFury3PlusOrchid are comparing it to the libraries listed below

• mhorlbeck / CRISPRiaDesign
  ☆35Updated 6 years ago
• biowdl / germline-DNA
  A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample
  ☆26Updated 2 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆40Updated 8 years ago
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆25Updated last year
• etirouthier / keras_dna
  ☆23Updated 4 years ago
• cnobles / iGUIDE
  Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…
  ☆21Updated 3 weeks ago
• pinellolab / AmpUMI
  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)
  ☆41Updated last year
• statbiophys / SONIA
  Infer selection pressures on features of amino acid CDR3 sequences.
  ☆25Updated last year
• liwenran / DeepTACT
  DeepTACT: predicting three-dimensional chromatin contacts via bootstrapping deep learning
  ☆20Updated 4 years ago
• kundajelab / simdna
  A python library for creating simulated regulatory DNA sequences
  ☆38Updated 2 years ago
• tsailabSJ / guideseq
  Analysis pipeline for the GUIDE-seq assay.
  ☆24Updated this week
• zhangchonglab / sgRNA-cleavage-activity-prediction
  Using our experimental screening dataset, we trained machine learning models to predict sgRNA activity.
  ☆12Updated 6 years ago
• CRISPRlab / CRISPRdisco
  CRISPR discovery pipeline
  ☆34Updated 6 years ago
• czbiohub-sf / cerebra
  A tool for fast and accurate summarizing of variant calling format (VCF) files
  ☆60Updated 2 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆27Updated 3 months ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year
• feldman4 / dna-barcodes
  Generate robust DNA barcode sets
  ☆31Updated last year
• zhpn1024 / ribotish
  Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data
  ☆38Updated 5 months ago
• chizksh / digenome-toolkit2
  Digenome-toolkit ver2.
  ☆16Updated 3 years ago
• RTH-tools / crisproff
  off-targeting assessment of Cas9 gRNAs
  ☆13Updated 4 years ago
• gagneurlab / concise
  Concise: Keras extension for regulatory genomics
  ☆35Updated 2 years ago
• Teichlab / bracer
  BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data
  ☆42Updated 8 months ago
• kipoi / kipoiseq
  Standard set of data-loaders for training and making predictions for DNA sequence-based models.
  ☆81Updated 8 months ago
• brineylab / grp-paper
  Code and data used in The Great Repertoire Project
  ☆30Updated 3 years ago
• keoughkath / AlleleAnalyzer
  A software tool for personalized and allele-specific CRISPR editing.
  ☆17Updated 3 years ago
• rraadd88 / beditor
  A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more
  ☆19Updated 11 months ago
• p-koo / learning_sequence_motifs
  "Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy
  ☆33Updated 5 years ago
• nf-core / epitopeprediction
  A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
  ☆44Updated this week
• jpiper / pyDNase
  Python module for the easy handling and analysis of DNase-seq data
  ☆37Updated 5 years ago
• murphycj / AGFusion
  Python package to annotate and visualize gene fusions.
  ☆63Updated 7 months ago