Comprehensive design of CRISPR gRNAs for nucleases and base editors
☆34Aug 13, 2026Updated last month
Alternatives and similar repositories for crisprDesign
Users that are interested in crisprDesign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆31Apr 2, 2026Updated 6 months ago
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 3 years ago
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.☆14Oct 18, 2021Updated 4 years ago
- Scripts for processing and predicting CRISPR/Cas9-generated mutations☆29Feb 25, 2023Updated 3 years ago
- Tutorials for the crisprVerse☆16Feb 10, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tool package to perform in-silico CRISPR analysis and assessment☆42Sep 24, 2026Updated 2 weeks ago
- Python library for genome editing, CRISPR gRNA design and prediction☆21Dec 2, 2025Updated 10 months ago
- ☆61Sep 27, 2021Updated 5 years ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆25Jul 2, 2024Updated 2 years ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- FlashFry: The rapid CRISPR target site characterization tool☆83Jul 27, 2026Updated 2 months ago
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- List of software/websites/databases/other stuff for genome engineering☆583Jul 29, 2026Updated 2 months ago
- Software used to design guide RNA sequences for CRISPR/Cas9 genome editing☆16Apr 13, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- DyNoPy☆10Sep 5, 2024Updated 2 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- a guideRNA database generation tool☆21Mar 3, 2025Updated last year
- Package to Score Sequences using Rule Set 3☆18Nov 10, 2025Updated 11 months ago
- CRISPR Cas9 ontarget prediction software☆34Jul 14, 2026Updated 2 months ago
- SPROUT is a machine learning tool to predict the DNA repair outcome in CRISPR experiments.☆16Jul 17, 2021Updated 5 years ago
- Clone of the Bioconductor repository for the basilisk package.☆29Nov 8, 2025Updated 11 months ago
- Importing and manipulating Hi-C data in R☆12Updated this week
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆112Sep 15, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- End-to-end guide design for CRISPR/Cas9 with machine learning☆141Jun 12, 2023Updated 3 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆242Jul 8, 2020Updated 6 years ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆357Sep 24, 2026Updated 2 weeks ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 5 years ago
- ☆16Jun 11, 2017Updated 9 years ago
- ☆11Jan 29, 2025Updated last year
- Modelling insertion efficiency for Prime Insertion Experiments☆13Apr 1, 2024Updated 2 years ago
- Generalizable Cas9/sgRNA prediction models for multiple Cas9 variants☆11May 4, 2026Updated 5 months ago
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆33Sep 1, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Convert sequence IDs between ucsc/refseq/genbank☆16Aug 28, 2018Updated 8 years ago
- ☆13Jan 18, 2017Updated 9 years ago
- ☆26Oct 15, 2020Updated 5 years ago
- RNA sequence design for a target protein sequence☆13Jun 2, 2026Updated 4 months ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago
- A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted nex…☆64Updated this week
- Snakemake workflow for comparing E-G links to experimental data☆25Sep 10, 2026Updated last month