Comprehensive design of CRISPR gRNAs for nucleases and base editors
☆27Mar 6, 2026Updated last month
Alternatives and similar repositories for crisprDesign
Users that are interested in crisprDesign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆25Apr 2, 2026Updated last week
- Collection of R packages that work in harmony for CRISPR gRNA design☆15Nov 21, 2025Updated 4 months ago
- CRISPR, faster, better – The Crackling method for whole-genome target detection☆11Jan 11, 2024Updated 2 years ago
- Scripts for processing and predicting CRISPR/Cas9-generated mutations☆28Feb 25, 2023Updated 3 years ago
- A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data☆12Feb 1, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 2 years ago
- Phenotype detection in pooled genetic perturbation screens☆12Mar 13, 2024Updated 2 years ago
- Analysis pipeline for the GUIDE-seq assay.☆30Aug 1, 2025Updated 8 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Nov 17, 2025Updated 4 months ago
- Tutorials for the crisprVerse☆14Feb 10, 2025Updated last year
- Software used to design guide RNA sequences for CRISPR/Cas9 genome editing☆16Apr 13, 2023Updated 2 years ago
- Package to Score Sequences using Rule Set 3☆15Nov 10, 2025Updated 5 months ago
- Core code for the DeepHF prediction tool☆40Jul 23, 2019Updated 6 years ago
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- CRISPR Cas9 ontarget prediction software☆32Mar 3, 2025Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆29Nov 8, 2025Updated 5 months ago
- FlashFry: The rapid CRISPR target site characterization tool☆81Jun 12, 2024Updated last year
- End-to-end guide design for CRISPR/Cas9 with machine learning☆138Jun 12, 2023Updated 2 years ago
- SPROUT is a machine learning tool to predict the DNA repair outcome in CRISPR experiments.☆15Jul 17, 2021Updated 4 years ago
- Importing and manipulating Hi-C data in R☆12Jul 17, 2025Updated 8 months ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆108Feb 15, 2024Updated 2 years ago
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- Snakemake workflow for comparing E-G links to experimental data☆23Mar 9, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.☆13Oct 18, 2021Updated 4 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆239Jul 8, 2020Updated 5 years ago
- Modelling insertion efficiency for Prime Insertion Experiments☆13Apr 1, 2024Updated 2 years ago
- Gene Expression Decomposition and Integration☆19Feb 9, 2026Updated 2 months ago
- ☆26Oct 15, 2020Updated 5 years ago
- Visualization of nucleotide alignment algorithms 🧬 DNA sequence as input, best aligning match as output.☆13Aug 11, 2020Updated 5 years ago
- ☆13Jan 18, 2017Updated 9 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆334Apr 2, 2026Updated last week
- Convert sequence IDs between ucsc/refseq/genbank☆16Aug 28, 2018Updated 7 years ago
- Data for paper "Random Access in Large-Scale DNA Data Storage"☆13Jan 11, 2018Updated 8 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 3 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago
- ☆72Feb 13, 2023Updated 3 years ago
- A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted nex…☆57Mar 6, 2026Updated last month