RTH-tools / crispronLinks
CRISPR Cas9 ontarget prediction software
☆27Updated 7 months ago
Alternatives and similar repositories for crispron
Users that are interested in crispron are comparing it to the libraries listed below
Sorting:
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆94Updated 3 years ago
- ☆58Updated 4 years ago
- ☆68Updated 2 years ago
- Package to Score Sequences using Rule Set 3☆12Updated 2 weeks ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- off-targeting assessment of Cas9 gRNAs☆14Updated 4 years ago
- ☆67Updated 7 months ago
- Fast and flexible ORF finder☆76Updated 3 years ago
- Python interface to running command-line and web-based MHC binding predictors☆98Updated last year
- Public repository for ShapeMapper 2 releases☆39Updated 10 months ago
- Microbial analysis in TCGA data☆91Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆42Updated last month
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- HLA-II ligand predictor.☆44Updated 2 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆69Updated last week
- Modelling RBP binding preferences to predict RPB binding sites☆11Updated 2 years ago
- code to run sei and obtain sei and sequence class predictions☆109Updated 2 years ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆21Updated 3 months ago
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆112Updated last year
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆16Updated 5 years ago
- Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python☆29Updated 3 years ago
- deep residual neural network for classifying the pathogenicity of missense mutations.☆115Updated 4 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆32Updated 3 weeks ago
- Analysis pipeline for the GUIDE-seq assay.☆80Updated 2 years ago
- Multi-class signal peptide prediction and structure decoding model.☆95Updated 8 months ago
- ☆22Updated 4 months ago
- C.Origami, a prediction and screening framework for cell type-specific 3D chromatin structure.☆80Updated last year
- ☆49Updated 3 years ago
- Analysis pipeline for the GUIDE-seq assay.☆27Updated 2 months ago