CRISPR Cas9 ontarget prediction software
☆32Mar 3, 2025Updated last year
Alternatives and similar repositories for crispron
Users that are interested in crispron are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- ☆75Feb 13, 2023Updated 3 years ago
- Analysis package for processing counts from genome-wide CRISPR/Cas9 screens☆16Feb 19, 2021Updated 5 years ago
- CRISPR/Cas9 guide RNA Design☆24Feb 20, 2024Updated 2 years ago
- CRISPR NGS data analysis and visualization pipeline☆16Jul 26, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆31Jun 6, 2026Updated 3 weeks ago
- Analyze NGS data for CRISPR (or any engineered endonuclease) activity and screen for clones. Screen for NHEJ or multiple HDR events concu…☆28Aug 8, 2023Updated 2 years ago
- a guideRNA database generation tool☆18Mar 3, 2025Updated last year
- ☆58Sep 27, 2021Updated 4 years ago
- Analyses of Ribo-seq rRNA fragments for Differential Ribosome Heterogeneity and Collision predictions☆15Jun 16, 2026Updated 2 weeks ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆240Jul 8, 2020Updated 5 years ago
- Package to Score Sequences using Rule Set 3☆16Nov 10, 2025Updated 7 months ago
- ☆33Dec 28, 2024Updated last year
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆28Apr 2, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Machine learning for accurate identification and classification of CRISPR-Cas systems☆23Dec 20, 2024Updated last year
- CRISPR discovery pipeline☆33Nov 2, 2018Updated 7 years ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated last year
- Scripts for processing and predicting CRISPR/Cas9-generated mutations☆28Feb 25, 2023Updated 3 years ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆350Jun 12, 2026Updated 3 weeks ago
- List of software/websites/databases/other stuff for genome engineering☆575Jun 20, 2024Updated 2 years ago
- Deep conditional autoregressive models for genome editing sequence-to-sequence problems☆10Jun 29, 2021Updated 5 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆103Aug 31, 2022Updated 3 years ago
- A local tool for high-throughput CRISPR single-guide RNA (sgRNA) design in plants.☆17Oct 14, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021☆17Apr 8, 2021Updated 5 years ago
- Genome scale metabolic models in SBML format☆11Nov 16, 2021Updated 4 years ago
- A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted nex…☆61Jun 22, 2026Updated last week
- Single-sequence protein-RNA complex structure prediction with biological language models☆17Sep 23, 2025Updated 9 months ago
- Generalizable Cas9/sgRNA prediction models for multiple Cas9 variants☆10May 4, 2026Updated 2 months ago
- Find and characterise transposable element insertions☆20May 26, 2023Updated 3 years ago
- C++ package for analysing CRISPR off targets☆21Apr 26, 2021Updated 5 years ago
- ☆13Jul 23, 2020Updated 5 years ago
- RNA editing detection based on machine learning☆10Feb 7, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆14May 30, 2021Updated 5 years ago
- Source codes and examples for DeepPrime☆14Dec 17, 2024Updated last year
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆110Feb 15, 2024Updated 2 years ago
- FlashFry: The rapid CRISPR target site characterization tool☆82Jun 12, 2024Updated 2 years ago
- A deep learning-based SNP calling method to identify SNPs based on low-coverage Nanopore sequencing reads.☆21Nov 20, 2022Updated 3 years ago
- ☆11Aug 27, 2023Updated 2 years ago
- ☆12Jan 27, 2025Updated last year