C++ package for analysing CRISPR off targets
☆21Apr 26, 2021Updated 5 years ago
Alternatives and similar repositories for CRISPR-Analyser
Users that are interested in CRISPR-Analyser are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CRISPR/Cas9 guide RNA Design☆24Feb 20, 2024Updated 2 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆100Aug 31, 2022Updated 3 years ago
- Collection of code for the GESTALT fate mapping paper using the CRISPR/Cas9 system☆24Jan 8, 2018Updated 8 years ago
- A software for the multispecies design of CRISPR/Cas9 libraries☆36Oct 7, 2022Updated 3 years ago
- Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data☆141May 17, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Software for error-tolerant coding of information into DNA sequences using finite-state transducers.☆12Jan 8, 2017Updated 9 years ago
- Haplotype-based somatic genome simulator☆10Apr 20, 2026Updated last month
- A new workflow for the custom design of CRISPR libraries.☆21Nov 22, 2022Updated 3 years ago
- Code for Shipman et al. 2017☆13Jul 12, 2017Updated 8 years ago
- Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency☆240Jul 8, 2020Updated 5 years ago
- ☆41Oct 25, 2018Updated 7 years ago
- The CRISPR assembler☆35May 13, 2021Updated 5 years ago
- Fast, Accurate, and Complete SSR Detection in Genomic Sequences☆11Jun 29, 2020Updated 5 years ago
- ☆12Sep 7, 2019Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens☆80May 21, 2020Updated 6 years ago
- Scripts for processing and predicting CRISPR/Cas9-generated mutations☆28Feb 25, 2023Updated 3 years ago
- CRISPR NGS data analysis and visualization pipeline☆16Jul 26, 2019Updated 6 years ago
- Assembling the cause of phenotypes and genotypes from NGS data☆29Jun 11, 2020Updated 5 years ago
- source code for HpcGridRunner☆16Aug 2, 2021Updated 4 years ago
- Draw genetic map (linkage map) in R☆14Nov 12, 2017Updated 8 years ago
- A Python package for Biopython that gives feature annotations from GenBank records a new and better life☆14Apr 27, 2016Updated 10 years ago
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- PLANiTS: a curated sequence reference dataset for plant ITS DNA metabarcoding☆11Mar 31, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- All source code of the crispor.org website☆89Updated this week
- Robust Open Reading Frame prediction (ANGLE re-implementation)☆16Aug 2, 2021Updated 4 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- Linear-time, low-memory construction of variation graphs☆20Feb 3, 2020Updated 6 years ago
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆22May 8, 2017Updated 9 years ago
- detection of mutations causing splicing change☆13Oct 6, 2022Updated 3 years ago
- A local tool for high-throughput CRISPR single-guide RNA (sgRNA) design in plants.☆17Oct 14, 2024Updated last year
- Amplicon Sequencing Analysis Pipeline☆19Sep 12, 2025Updated 8 months ago
- Pan-genome Seed Index☆20Mar 12, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Software for exploration of gene expression data from single-cell RNA sequencing.☆28Jun 20, 2019Updated 6 years ago
- Genome Annotation Library - A perl toolkit for working with SO compliant genome annotations☆17Feb 5, 2025Updated last year
- python access to UCSC genomes database☆136Aug 27, 2020Updated 5 years ago
- Minor Variant Calling and Phasing Tools☆15Jan 13, 2022Updated 4 years ago
- exploring viral genome assembly with variation graph tools☆20May 18, 2020Updated 6 years ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Sep 19, 2022Updated 3 years ago
- Predict MLST directly from uncorrected long reads☆27Oct 31, 2025Updated 6 months ago