pinellolab / PrimeDesign
Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!
☆22Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for PrimeDesign
- Modelling insertion efficiency for Prime Insertion Experiments☆13Updated 7 months ago
- iCodon customizes gene expression based on the codon composition☆13Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆35Updated last week
- off-targeting assessment of Cas9 gRNAs☆12Updated 3 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆25Updated last year
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆20Updated last year
- Making bioinformatics fun again☆60Updated 5 months ago
- Nanopore Plasmid Sequencing☆30Updated last year
- DRUGZ software☆22Updated 3 years ago
- Predicting gene expression levels from genomic sequences☆49Updated 4 years ago
- CRISPR Indel, base edit analysis☆10Updated 4 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 6 months ago
- visual analysis of your VCF files☆25Updated last year
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆30Updated last year
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆25Updated last year
- gatk4 RNA variant calling pipeline☆37Updated 3 weeks ago
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆16Updated last year
- ☆33Updated last month
- Variant catalogue pipeline☆25Updated 3 months ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆67Updated 7 months ago
- Code and data used in The Great Repertoire Project☆29Updated 3 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆12Updated 4 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆33Updated last week
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆71Updated this week
- Master of Pores 2☆23Updated last year
- Public repository for ShapeMapper 2 releases☆30Updated 9 months ago
- Fast and flexible ORF finder☆60Updated 2 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆20Updated last year
- Code for the CRISPOR article, all data and code to create figures and analysis☆41Updated 8 years ago
- ClinVar Mapping and Annotation Toolkit☆19Updated 3 weeks ago