Open-source C++ and Python module for opening binary timsTOF data files.
☆50Apr 22, 2026Updated last month
Alternatives and similar repositories for opentims
Users that are interested in opentims are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Jun 28, 2021Updated 4 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆12May 11, 2021Updated 5 years ago
- DLL and SO from Bruker.☆12Feb 25, 2026Updated 3 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆95Mar 18, 2026Updated 2 months ago
- ☆46Mar 14, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆31Apr 28, 2026Updated last month
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆15Oct 6, 2023Updated 2 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆13Apr 14, 2026Updated last month
- ☆29May 20, 2025Updated last year
- Libraries for fine isotopic structure calculator.☆43Mar 27, 2026Updated 2 months ago
- ☆39Mar 16, 2026Updated 2 months ago
- DeepLC: Retention time prediction for peptides carrying any modification.☆77Apr 24, 2026Updated last month
- An open-source Python package to unify raw MS data accession and storage.☆32Apr 13, 2026Updated last month
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15May 8, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.☆12Dec 22, 2021Updated 4 years ago
- MS/MS prediction for peptides☆24Dec 18, 2020Updated 5 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Apr 22, 2026Updated last month
- The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis …☆304Updated this week
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 3 months ago
- ☆16Oct 3, 2023Updated 2 years ago
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 5 months ago
- A "fairly fast" ISOtope PAttern Calculator for Python☆13Sep 27, 2023Updated 2 years ago
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆66Apr 11, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- High level functionality to support and simplify metabolomics data annotation.☆20Mar 19, 2026Updated 2 months ago
- AutoRT: Peptide retention time prediction using deep learning☆30Jul 31, 2024Updated last year
- Python package for efficient mass spectrometry data processing and visualization☆169Mar 5, 2026Updated 2 months ago
- C# Mass Spectrometry Library☆40Jun 14, 2022Updated 3 years ago
- A diaPASEF spectrum-centric analysis tool☆14Mar 23, 2026Updated 2 months ago
- An LC-MS/MS glycan and glycopeptide search engine☆14Sep 15, 2025Updated 8 months ago
- EasyPQP: Simple library generation for OpenSWATH☆11Apr 21, 2026Updated last month
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆14Feb 12, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆131Mar 23, 2026Updated 2 months ago
- Thermo MSFileReader Python bindings☆70May 4, 2021Updated 5 years ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆110Updated this week
- DIA-NN - a universal automated software suite for DIA proteomics data analysis.☆443Apr 30, 2026Updated 3 weeks ago
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆23Apr 17, 2026Updated last month
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆92Aug 17, 2023Updated 2 years ago
- A cross-platform proteomics data analysis suite☆297May 21, 2026Updated last week