Open-source C++ and Python module for opening binary timsTOF data files.
☆49Sep 26, 2026Updated this week
Alternatives and similar repositories for opentims
Users that are interested in opentims are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Jun 28, 2021Updated 5 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆12May 11, 2021Updated 5 years ago
- DLL and SO from Bruker.☆12Feb 25, 2026Updated 7 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆98Jun 3, 2026Updated 3 months ago
- ☆49Mar 14, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆33Updated this week
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆15Oct 6, 2023Updated 2 years ago
- Collisional cross-section prediction for modified and multiconformational peptides☆14Aug 26, 2026Updated last month
- ☆41Aug 25, 2026Updated last month
- Libraries for fine isotopic structure calculator.☆48Updated this week
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Jul 7, 2026Updated 2 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆50Jul 13, 2026Updated 2 months ago
- MS/MS prediction for peptides☆25Dec 18, 2020Updated 5 years ago
- Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.☆12Dec 22, 2021Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Streamlining Mass Spectrometry Data Visualization with Pandas☆25Sep 16, 2026Updated last week
- DeepLC: Retention time prediction for peptides carrying any modification.☆80Updated this week
- The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis …☆322Updated this week
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 7 months ago
- ☆38Sep 11, 2026Updated 2 weeks ago
- ☆17Oct 3, 2023Updated 2 years ago
- An open-source Python package to unify raw MS data accession and storage.☆35Aug 31, 2026Updated 3 weeks ago
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆66Updated this week
- A "fairly fast" ISOtope PAttern Calculator for Python☆13Sep 27, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 4 years ago
- AutoRT: Peptide retention time prediction using deep learning☆31Jul 31, 2024Updated 2 years ago
- High level functionality to support and simplify metabolomics data annotation.☆21Aug 5, 2026Updated last month
- Python package for efficient mass spectrometry data processing and visualization☆169Aug 18, 2026Updated last month
- Automatically exported from code.google.com/p/mstoolkit☆30Dec 1, 2025Updated 9 months ago
- C# Mass Spectrometry Library☆41Jun 14, 2022Updated 4 years ago
- A diaPASEF spectrum-centric analysis tool☆14Mar 23, 2026Updated 6 months ago
- An LC-MS/MS glycan and glycopeptide search engine☆14Sep 15, 2025Updated last year
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆132Mar 23, 2026Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- EasyPQP: Simple library generation for OpenSWATH☆11Apr 21, 2026Updated 5 months ago
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆14Feb 12, 2021Updated 5 years ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆109Updated this week
- DIA-NN - a universal automated software suite for DIA proteomics data analysis.☆481Sep 16, 2026Updated last week
- This project is a Graphical User Interface frontend for GlycoGenius, a python program that aims to be an all-in-one solution for data ana…☆17Jan 25, 2026Updated 8 months ago
- Thermo MSFileReader Python bindings☆72May 4, 2021Updated 5 years ago
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆26Aug 8, 2026Updated last month