UWPR / CometLinks
An tandem mass spectrometry (MS/MS) sequence database search tool.
☆53Updated last week
Alternatives and similar repositories for Comet
Users that are interested in Comet are comparing it to the libraries listed below
Sorting:
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆126Updated 3 weeks ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆101Updated this week
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 11 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆83Updated 3 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆67Updated 2 weeks ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆124Updated 2 months ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆107Updated last week
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆50Updated this week
- PDV: an integrative proteomics data viewer☆60Updated this week
- Rescoring and spectral library generation pipeline for proteomics.☆53Updated this week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆48Updated 3 weeks ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year
- Community-curated tutorials and datasets for ML in proteomics☆56Updated 3 months ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Updated 2 weeks ago
- Instrument Application Programming Interface☆51Updated 4 months ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆92Updated 2 months ago
- Deep learning framework for proteomics☆144Updated last week
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆60Updated last month
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆25Updated 4 months ago
- A Python interface to proteomics data repositories☆36Updated 7 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆94Updated this week
- ☆21Updated 11 months ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆67Updated last month
- Democratizing ML in proteomics☆52Updated last week
- ☆68Updated last year
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆62Updated last week
- Python package for investigating the structural context of PTMs☆28Updated last year
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆23Updated 6 months ago
- ☆13Updated last year
- DeepLC: Retention time prediction for peptides carrying any modification.☆73Updated 3 weeks ago