kusterlab / universal_spectrum_explorer
☆15Updated 3 years ago
Alternatives and similar repositories for universal_spectrum_explorer:
Users that are interested in universal_spectrum_explorer are comparing it to the libraries listed below
- Rescoring and spectral library generation pipeline for proteomics.☆39Updated last week
- An open-source Python package to unify raw MS data accession and storage.☆21Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆21Updated last week
- ☆26Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆28Updated 2 weeks ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆42Updated last week
- Python framework for Deep Learning in Proteomics☆24Updated 2 weeks ago
- ☆13Updated last year
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- MS/MS prediction for peptides☆22Updated 4 years ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆25Updated last week
- Democratizing ML in proteomics☆34Updated this week
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆80Updated 5 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆48Updated last week
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 3 weeks ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆47Updated this week
- Instrument Application Programming Interface☆45Updated last month
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆20Updated 3 months ago
- TimsR: Easy access to timsTOF Pro data from R.☆9Updated 3 years ago
- ☆36Updated this week
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated last month
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Updated 2 years ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆43Updated last week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆26Updated 2 weeks ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- A tool for summarizing open search results☆15Updated last week
- The Git Account of LCMSMethods.org☆11Updated 5 years ago
- Differential Expression Analysis tool box R lang package for omics data☆44Updated this week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆41Updated last week