Alternatives and similar repositories for masscube

Users that are interested in masscube are comparing it to the libraries listed below

• sirius-ms / sirius-client-openAPI
  OpenAPI based libraries for different programming languages like R and Python
  ☆18Updated 2 weeks ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 3 years ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆28Updated 7 months ago
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆34Updated last week
• eMetaboHUB / MS-CleanR
  ☆26Updated 2 years ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆29Updated 3 weeks ago
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆16Updated last month
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆30Updated last year
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆56Updated last month
• YasinEl / mzRAPP
  Tool for reliability assessment of omics peprocessing
  ☆11Updated last year
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆33Updated 4 years ago
• OpenMS / streamlit-template
  ☆16Updated 2 weeks ago
• pnnl / deimos
  ☆36Updated 3 weeks ago
• czbiohub-sf / Rapid-QC-MS
  Realtime quality control for mass spectrometry data acquisition
  ☆21Updated last month
• biorack / blink
  ☆11Updated 11 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆24Updated last year
• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆16Updated last month
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆53Updated 2 months ago
• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆25Updated 8 months ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆30Updated 2 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆30Updated last year
• zhengfj1994 / PPGB_MS2
  ☆11Updated last year
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆13Updated 2 weeks ago
• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆42Updated 6 months ago
• idslme / IDSL_MINT
  A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
  ☆26Updated last year
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated last year
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆39Updated 3 weeks ago