Alternatives and similar repositories for masscube:

Users that are interested in masscube are comparing it to the libraries listed below

• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated 11 months ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 3 years ago
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆14Updated 5 months ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• YasinEl / mzRAPP
  Tool for reliability assessment of omics peprocessing
  ☆10Updated last year
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆19Updated 5 months ago
• Philipbear / BUDDY_Metabolomics
  Molecular formula discovery via bottom-up MS/MS interrogation
  ☆13Updated 8 months ago
• zhengfj1994 / PPGB_MS2
  ☆10Updated 5 months ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆26Updated last month
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆16Updated 6 months ago
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆44Updated 7 months ago
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• merlin-ms / awesome-mass-spectral-libraries
  ☆18Updated 11 months ago
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆17Updated last year
• OpenMS / streamlit-template
  ☆12Updated last week
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆14Updated 2 years ago
• MRMkit / MRMkit
  ☆9Updated 2 weeks ago
• biorack / simile
  ☆16Updated 2 years ago
• ODonnell-Lipidomics / LipidFinder
  LipidFinder: A computational workflow for discovery of new lipid molecular species
  ☆19Updated 4 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆27Updated 2 months ago
• czbiohub-sf / Rapid-QC-MS
  Realtime quality control for mass spectrometry data acquisition
  ☆16Updated 6 months ago
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 4 months ago
• osenan / cliqueMS
  Annotation of in source LC/MS data
  ☆12Updated 6 months ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago
• PHOENIXcenter / deeprtalign
  a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
  ☆12Updated last year
• idslme / IDSL_MINT
  A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
  ☆20Updated last year
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated last year