gtluu / timsconvert
☆37Updated last month
Alternatives and similar repositories for timsconvert:
Users that are interested in timsconvert are comparing it to the libraries listed below
- Rescoring and spectral library generation pipeline for proteomics.☆43Updated last week
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆54Updated 2 weeks ago
- Open-source C++ and Python module for opening binary timsTOF data files.☆48Updated last month
- Instrument Application Programming Interface☆46Updated 2 months ago
- An open-source Python package to unify raw MS data accession and storage.☆24Updated 3 weeks ago
- ☆26Updated last year
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated last month
- modular & open DIA search☆69Updated 2 weeks ago
- ☆20Updated 3 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 2 months ago
- Democratizing ML in proteomics☆36Updated 2 weeks ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆82Updated last month
- ☆26Updated 2 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆30Updated 2 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆43Updated last month
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆32Updated 3 weeks ago
- This is a collection of minimal code to visualize various aspects of proteomics data.☆76Updated 3 years ago
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆64Updated last year
- A tool for summarizing open search results☆16Updated this week
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆63Updated last week
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆25Updated 5 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆87Updated last month
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆20Updated 2 weeks ago
- Python framework for Deep Learning in Proteomics☆26Updated last week
- ☆14Updated 3 years ago
- An open-source Python package for dia-PASEF methods with Automated Isolation Design (py_diAID) from the Mann Labs at the Max Planck Inst…☆21Updated 2 months ago
- A diaPASEF spectrum-centric analysis tool☆12Updated this week