thermofisherlsms / RawFileReader

Related projects ⓘ

Alternatives and complementary repositories for RawFileReader

• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆44Updated last month
• PNNL-Comp-Mass-Spec / Thermo-Raw-File-Reader
  .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
  ☆38Updated 2 months ago
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆64Updated last year
• compomics / ThermoRawFileParser
  Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono
  ☆189Updated last month
• MannLabs / alphadia
  modular & open DIA search
  ☆55Updated this week
• mafreitas / tdf2mzml
  ☆25Updated last year
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆44Updated last month
• diogobor / Scout
  MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.
  ☆19Updated last week
• compomics / ThermoRawFileParserGUI
  Graphical user interface for the ThermoRawFileParser
  ☆20Updated 4 months ago
• pFindStudio / pGlyco3
  ☆15Updated 2 months ago
• MannLabs / directlfq
  Fast and accurate label-free quantification for small and very large numbers of proteomes
  ☆42Updated 2 weeks ago
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆33Updated 2 months ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆38Updated this week
• michaelmarty / UniDec
  Universal Deconvolution of Mass and Ion Mobility Spectra
  ☆65Updated last week
• UWPR / Comet
  An tandem mass spectrometry (MS/MS) sequence database search tool.
  ☆45Updated last week
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 2 years ago
• gtluu / timsconvert
  ☆32Updated last month
• MannLabs / alphamap
  An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.
  ☆76Updated 2 weeks ago
• Protea-Glycosciences / GlyCombo
  GlyCombo, a combinatorial glycan composition assignment tool
  ☆12Updated last month
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆33Updated this week
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆28Updated last week
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆68Updated 3 years ago
• Nesvilab / MSFragger
  Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics
  ☆107Updated 5 months ago
• MannLabs / alphatims
  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…
  ☆81Updated last year
• UWPR / Lorikeet
  Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.
  ☆17Updated last year
• Nesvilab / diaTracer
  A diaPASEF spectrum-centric analysis tool
  ☆12Updated 4 months ago
• chhh / batmass
  Mass spectrometry data visualization
  ☆36Updated 3 years ago
• compomics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆38Updated this week
• Nesvilab / PTM-Shepherd
  A tool for summarizing open search results
  ☆14Updated last month
• statisticalbiotechnology / diffacto
  ☆13Updated 8 months ago