☆31Feb 18, 2026Updated last week
Alternatives and similar repositories for mzdata
Users that are interested in mzdata are comparing it to the libraries listed below
Sorting:
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆40Updated this week
- EuBIC-MS Developers Meeting 2025 on Computational Mass Spectrometry☆11Nov 8, 2024Updated last year
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆16Feb 22, 2026Updated last week
- ☆28May 20, 2025Updated 9 months ago
- CLI toolkit for fast analysis of DIA proteomics experiments and in silico library prediction☆19Updated this week
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- A diaPASEF spectrum-centric analysis tool☆13Dec 24, 2025Updated 2 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆50Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Feb 19, 2026Updated last week
- Spectral library searching using approximate nearest neighbor techniques.☆48Feb 11, 2026Updated 2 weeks ago
- Proteomics search & quantification so fast that it feels like magic☆273Jan 6, 2026Updated last month
- MSDK source code repository☆40Sep 22, 2022Updated 3 years ago
- A programmable and modular LC/MS simulator in Python☆24Feb 11, 2026Updated 2 weeks ago
- Design and implementation of FAIR Data Cube☆11Jun 2, 2025Updated 8 months ago
- https://taxonomicallyinformedannotation.github.io/tima☆12Updated this week
- A Python interface to proteomics data repositories☆36Jun 19, 2025Updated 8 months ago
- Libraries for fine isotopic structure calculator.☆41Feb 17, 2026Updated last week
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆22Jan 19, 2025Updated last year
- Computational analysis for mass spectrometry-based proteomics data☆20Feb 22, 2026Updated last week
- Fundamentals public repo☆12Updated this week
- ☆45Mar 14, 2025Updated 11 months ago
- PSI-MOD ontology for modified and unmodified amino acid residues☆14Jan 8, 2026Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Oct 31, 2025Updated 4 months ago
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Mar 10, 2025Updated 11 months ago
- A fantastic crate for formatting numbers using the appropriate unicode characters☆15Jan 13, 2026Updated last month
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆107Feb 13, 2026Updated 2 weeks ago
- Cleavage of polypeptide sequences☆12Oct 14, 2025Updated 4 months ago
- LipidCreator is a powerful stand alone kick-off tool for targeted lipidomics and a plugin for Skyline. It provides convenient tools to ge…☆11Dec 12, 2025Updated 2 months ago
- Library for mass spectrometry projects☆27Updated this week
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆23Jul 25, 2025Updated 7 months ago
- MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)☆12Aug 26, 2022Updated 3 years ago
- ☆12Jun 13, 2024Updated last year
- EuBIC 2023 developer's meeting☆13Jan 16, 2023Updated 3 years ago
- Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment☆24Oct 8, 2025Updated 4 months ago
- Community-curated tutorials and datasets for ML in proteomics☆57Oct 31, 2025Updated 4 months ago
- Repository for mzML and the corresponding examples☆34Apr 5, 2024Updated last year
- A deep learning toolkit for mass spectrometry☆87Jan 7, 2026Updated last month
- Synthetic mzML writer☆13Mar 10, 2025Updated 11 months ago