LuckyMD / Code_snippetsLinks
A repo with random short code snippets
☆41Updated 6 years ago
Alternatives and similar repositories for Code_snippets
Users that are interested in Code_snippets are comparing it to the libraries listed below
Sorting:
- Single-Cell Clustering Assessment Framework☆107Updated 2 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆60Updated 3 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 6 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- R package for Pathway RespOnsive GENe activity inference☆111Updated 2 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated 2 weeks ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆79Updated 2 years ago
- A tool that allows to get UMI counts from a single cell protein assay☆86Updated 7 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 5 years ago
- R implementation of MULTI-seq sample classification workflow☆64Updated 2 years ago
- ☆44Updated 3 weeks ago
- ☆63Updated 5 years ago
- Analysis of cell-cell communication at single-cell resolution☆105Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆91Updated 6 months ago
- Publication Page for MPAL Paper 2019☆83Updated 5 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆40Updated 11 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆66Updated 5 months ago
- Snakemake pipeline that works with the scIB package to benchmark data integration methods.☆80Updated 10 months ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆102Updated last week
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- scWGCNA☆61Updated 3 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆112Updated 7 months ago
- ☆46Updated 3 years ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- ☆73Updated 2 years ago
- R package for semi-supervised single-cell data integration☆91Updated this week
- ☆71Updated last year
- A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…☆66Updated 3 months ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago