KatyBrown / CIAlignLinks
☆131Updated last year
Alternatives and similar repositories for CIAlign
Users that are interested in CIAlign are comparing it to the libraries listed below
Sorting:
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆149Updated 3 weeks ago
- Find clustered hits from a BLAST search☆121Updated 10 months ago
- Bioinformatics tool for Locus Visualisation☆124Updated 4 months ago
- Similarity networks of biosynthetic gene clusters☆130Updated this week
- sensitive and precise assembly of short sequencing reads☆161Updated 11 months ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆64Updated this week
- MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics☆194Updated last month
- Follow up to Grace Blackwell's 661k dataset, for 2023☆123Updated last month
- Fast and flexible ORF finder☆76Updated 3 years ago
- MGnify genome analysis pipeline☆106Updated 2 months ago
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago
- Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redunda…☆160Updated 9 months ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆171Updated last month
- Logan Unitigs and Contigs☆171Updated 3 weeks ago
- Catalog of genomic indexes freely available from public clouds☆64Updated last month
- Download files from NCBI Entrez by accession☆129Updated last year
- Phage Annotation using Protein Structures☆128Updated 3 weeks ago
- a tool for inferring species tree from sequencing reads☆152Updated last week
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆97Updated 2 years ago
- RNA secondary structure/sequence profiles for homology search and alignment☆114Updated 11 months ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆72Updated 5 months ago
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆86Updated last month
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆59Updated last year
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 4 months ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆101Updated last year
- A console-based alignment viewer☆116Updated 3 months ago
- Antibiotic resistance prediction in minutes☆112Updated 10 months ago
- Pipeline for metabolic annotation of microbial genomes☆150Updated 6 months ago
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆181Updated 2 weeks ago
- List of genome assembly tools☆78Updated last week