KatyBrown / CIAlignLinks
☆131Updated last year
Alternatives and similar repositories for CIAlign
Users that are interested in CIAlign are comparing it to the libraries listed below
Sorting:
- Bioinformatics tool for Locus Visualisation☆113Updated 3 months ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆147Updated 3 weeks ago
- Find clustered hits from a BLAST search☆120Updated 8 months ago
- Logan Unitigs and Contigs☆145Updated 3 weeks ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆114Updated last week
- MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics☆192Updated this week
- sensitive and precise assembly of short sequencing reads☆160Updated 10 months ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 2 months ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆168Updated last week
- Similarity networks of biosynthetic gene clusters☆126Updated this week
- Download files from NCBI Entrez by accession☆127Updated 11 months ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆62Updated last week
- Catalog of genomic indexes freely available from public clouds☆63Updated 2 weeks ago
- MGnify genome analysis pipeline☆107Updated 3 weeks ago
- Pipeline for metabolic annotation of microbial genomes☆150Updated 5 months ago
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago
- Antibiotic resistance prediction in minutes☆111Updated 9 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆96Updated 2 years ago
- Fast and flexible ORF finder☆73Updated 3 years ago
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆105Updated 3 months ago
- Systematic search of all known anti-phage systems.☆114Updated 2 months ago
- a tool for inferring species tree from sequencing reads☆150Updated 2 weeks ago
- RNA secondary structure/sequence profiles for homology search and alignment☆113Updated 9 months ago
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes☆154Updated 2 months ago
- Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redunda…☆160Updated 8 months ago
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆86Updated 2 weeks ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆51Updated 6 months ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆36Updated 6 years ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- A console-based alignment viewer☆115Updated 2 months ago