KatyBrown / CIAlignLinks
☆129Updated 9 months ago
Alternatives and similar repositories for CIAlign
Users that are interested in CIAlign are comparing it to the libraries listed below
Sorting:
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆140Updated 3 weeks ago
- Bioinformatics tool for Locus Visualisation☆106Updated last month
- Logan Unitigs and Contigs☆136Updated last month
- MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics☆190Updated 11 months ago
- sensitive and precise assembly of short sequencing reads☆156Updated 8 months ago
- a tool for inferring species tree from sequencing reads☆150Updated 4 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆110Updated 7 months ago
- Find clustered hits from a BLAST search☆117Updated 6 months ago
- Pipeline for metabolic annotation of microbial genomes☆149Updated 3 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆95Updated 2 years ago
- Similarity networks of biosynthetic gene clusters☆117Updated last week
- Download files from NCBI Entrez by accession☆126Updated 9 months ago
- DDBJ Fast Annotation and Submission Tool☆79Updated last month
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 2 weeks ago
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆67Updated 2 months ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆105Updated last month
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes☆147Updated last week
- MGnify genome analysis pipeline☆106Updated last week
- A console-based alignment viewer☆112Updated last week
- Systematic search of all known anti-phage systems.☆108Updated last week
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆62Updated 6 months ago
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆105Updated last month
- Assembled Genomes Compressor☆166Updated 7 months ago
- A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.☆121Updated last year
- Fast and flexible ORF finder☆71Updated 3 years ago
- Exploring the "dusk matter" of the RNA virosphere☆35Updated 3 years ago
- FastOMA is a scalable software package to infer orthology relationship.☆76Updated last week
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆102Updated last year
- Bioinformatics program inStrain☆173Updated last month
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆161Updated 3 weeks ago