mongiardino / genesortRLinks
Sorting and subsampling phylogenomic datasets
☆27Updated 7 months ago
Alternatives and similar repositories for genesortR
Users that are interested in genesortR are comparing it to the libraries listed below
Sorting:
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆28Updated 2 months ago
- Computational Analysis of Gene Expression Evolution☆43Updated 3 months ago
- Multi-genome synteny block visualization tool☆47Updated last month
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- MCMCtree tutorials☆26Updated last year
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- R package to draw syntenic plots in 3 different styles☆42Updated 2 months ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated 10 months ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 5 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 9 months ago
- read and analyse RepeatMasker output☆27Updated 2 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 6 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- ☆45Updated 3 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- Portable solution to generate genome alignment chains using lastz☆59Updated last month
- ☆24Updated last week
- Analyses of sex chromosome evolution in songbirds☆16Updated 6 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆30Updated 3 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- ContScout sequence contamination filter tool☆26Updated 5 months ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- ☆31Updated 10 months ago
- ☆29Updated last year