kiharalab / GO2SumLinks
GO2Sum is a deep learning based summarizer that generates human-readable summaries for GO term annotations made by protein function prediction methods.
☆16Updated last year
Alternatives and similar repositories for GO2Sum
Users that are interested in GO2Sum are comparing it to the libraries listed below
Sorting:
- DeepECtransformer☆26Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- Fast protein domain structure embedding+search tool☆21Updated last month
- Code for LazyAF pipeline☆20Updated last year
- A package for making tree-based visualizations for embedding vectors☆9Updated 2 years ago
- Long disorder consensus predictor☆15Updated 3 months ago
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆16Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆29Updated last year
- Ancestral Sequence Reconstruction in Python☆14Updated 6 years ago
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆19Updated last year
- Protein Sequence Annotation with Language Models☆22Updated last month
- Cross-protein transfer learning for variant effect prediction☆20Updated last year
- Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.☆39Updated last week
- ☆22Updated last year
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆25Updated last year
- Scripts to generate and analyze afdb clusters☆11Updated last year
- Peptide library design☆23Updated 4 years ago
- Evolutionary conservation estimation of residues or nucleotides☆44Updated 3 years ago
- a collection of colabs useful for molecular biology☆30Updated last year
- ☆40Updated 10 months ago
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆17Updated 5 years ago
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆22Updated 2 weeks ago
- ☆40Updated 9 months ago
- Map genetic variants and protein positions to protein interfaces in 3D☆13Updated last year
- Feature map and function annotation of Proteins☆33Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆38Updated 9 months ago
- Python framework for doing ancestral sequence reconstruction☆38Updated 11 months ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆26Updated 5 months ago
- A domain parser for Alphafold models☆38Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆28Updated last year