Alternatives and similar repositories for ProtCID

Users that are interested in ProtCID are comparing it to the libraries listed below

• sarisabban / RosettaAbinitio
  A bash script for an automated Rosetta Abinitio folding simulation on an HPC
  ☆11Updated 5 years ago
• haddocking / binding-affinity-benchmark
  Protein-protein binding affinity benchmark
  ☆16Updated 8 months ago
• Faezov / PDBrenum
  ☆30Updated 5 months ago
• tommyhuangthu / SSIPe
  EvoEF + evolutionary profile for ddG_bind prediction
  ☆14Updated 2 weeks ago
• wells-wood-research / BAlaS
  Source code for the BUDE Alanine Scan web application.
  ☆12Updated 5 months ago
• ohuelab / MEGADOCK-on-Colab
  MEGADOCK on Google Colaboratory
  ☆18Updated 2 years ago
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆27Updated 2 years ago
• TurtleTools / alphafold-structural-space
  Structural space exploration of AlphaFold DB
  ☆12Updated 4 years ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 3 months ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆44Updated last year
• DeepRank / iScore
  iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…
  ☆31Updated 3 years ago
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆24Updated 5 months ago
• KeatingLab / PixelDB
  ☆13Updated 8 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆34Updated last year
• sdaberdaku / AntibodyInterfacePrediction
  software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"
  ☆13Updated 4 years ago
• DeepRank / PSSMGen
  Generates consistent PSSM and/or PDB files for protein-protein complexes
  ☆20Updated 3 years ago
• wallnerlab / ProQDock
  ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…
  ☆11Updated 3 years ago
• alirezaomidi / AFM-IDR
  Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"
  ☆16Updated 10 months ago
• gdocking / gdock
  Protein-Protein Docking using Genetic Algorithm
  ☆18Updated last year
• LPDI-EPFL / rstoolbox
  Python Toolbox For Rosetta Silent Files Processing
  ☆16Updated 6 years ago
• soedinglab / pdbx
  pdbx is a parser module in python for structures of the protein data bank in the mmcif format
  ☆29Updated last year
• LPDI-EPFL / topobuilder
  Parametric Building of de novo Functional Topologies
  ☆44Updated 3 years ago
• haddocking / fcc
  Fraction of Common Contacts Clustering Algorithm for Protein Structures
  ☆27Updated 4 years ago
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• GodzikLab / FATCAT-dist
  ☆17Updated 2 years ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• vosslab / vossvolvox
  3v: Voss Volume Voxelator
  ☆12Updated 3 months ago
• Hoecker-Lab / protlego
  Automated construction of protein chimeras and their analysis.
  ☆15Updated 2 years ago
• compbiomed-unito / acdc-nn
  ☆22Updated 2 years ago
• Kortemme-Lab / ddg
  A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.
  ☆17Updated 9 years ago