DunbrackLab / ProtCIDLinks
Protein common interface databases
☆10Updated 6 years ago
Alternatives and similar repositories for ProtCID
Users that are interested in ProtCID are comparing it to the libraries listed below
Sorting:
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Updated 5 years ago
- Source code for the BUDE Alanine Scan web application.☆12Updated 5 months ago
- ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support V…☆11Updated 3 years ago
- ☆30Updated 6 months ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Updated last month
- Structural space exploration of AlphaFold DB☆12Updated 4 years ago
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆27Updated 2 years ago
- Protein-protein binding affinity benchmark☆16Updated 9 months ago
- ☆25Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 4 months ago
- EvolveX, a de novo antibody computational design pipeline.☆12Updated 2 months ago
- ☆23Updated 4 years ago
- ☆13Updated 8 years ago
- Python package to manage protein structures and their annotations☆44Updated last year
- Graph Network for protein-protein interface including language model features☆33Updated last year
- ☆17Updated 2 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆24Updated 5 months ago
- ☆23Updated this week
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆16Updated 11 months ago
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆19Updated 2 weeks ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆27Updated 2 years ago
- ☆17Updated 2 years ago
- A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.☆19Updated 3 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆34Updated 2 years ago
- A program fror inter-protein contact prediction from structures of interacting proteins☆19Updated last year
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Updated last week
- ☆22Updated 3 weeks ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Updated last year
- Automated construction of protein chimeras and their analysis.☆15Updated 2 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago