Alternatives and similar repositories for ProtCID

Users that are interested in ProtCID are comparing it to the libraries listed below

• tommyhuangthu / SSIPe
  EvoEF + evolutionary profile for ddG_bind prediction
  ☆14Updated 2 years ago
• haddocking / binding-affinity-benchmark
  Protein-protein binding affinity benchmark
  ☆15Updated 4 months ago
• sarisabban / RosettaAbinitio
  A bash script for an automated Rosetta Abinitio folding simulation on an HPC
  ☆10Updated 4 years ago
• Faezov / PDBrenum
  ☆30Updated last month
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆25Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆28Updated last year
• GodzikLab / FATCAT-dist
  ☆15Updated 2 years ago
• Qrouger / PPIFold
  ☆19Updated last week
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• alirezaomidi / AFM-IDR
  Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"
  ☆16Updated 6 months ago
• vendruscolo-lab / AlphaFold-IDP
  This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…
  ☆18Updated 6 months ago
• hkotb / xprotcas
  ☆8Updated 2 years ago
• TurtleTools / alphafold-structural-space
  Structural space exploration of AlphaFold DB
  ☆12Updated 3 years ago
• Hoecker-Lab / protlego
  Automated construction of protein chimeras and their analysis.
  ☆15Updated last year
• Furman-Lab / PatchMAN
  ☆26Updated last month
• ohuelab / MEGADOCK-on-Colab
  MEGADOCK on Google Colaboratory
  ☆17Updated last year
• KeatingLab / PixelDB
  ☆13Updated 7 years ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆21Updated 3 weeks ago
• sokrypton / roscon2024
  Tutorial files
  ☆11Updated 10 months ago
• pepamengual / UEP
  ☆9Updated 2 years ago
• Wang-Lin-boop / PPI-Miner
  A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design
  ☆19Updated 4 months ago
• ihmwg / python-modelcif
  Python package for handling ModelCIF mmCIF and BinaryCIF files
  ☆12Updated 2 weeks ago
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆24Updated 3 years ago
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆21Updated 9 months ago
• fteufel / alphafold-peptide-receptors
  Identifying peptide-receptor interactions using AlphaFold-Multimer
  ☆27Updated last year
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• zw2x / glinter
  Graph Learning of INTER-protein contacts
  ☆9Updated 3 years ago
• wells-wood-research / alphafold2-multiprocessing
  Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
  ☆23Updated 3 years ago
• t03i / FlatProt
  A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.
  ☆13Updated last week