Rocklin-Lab / cdna-display-proteolysis-pipeline

Related projects ⓘ

Alternatives and complementary repositories for cdna-display-proteolysis-pipeline

• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆25Updated this week
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆23Updated 4 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆22Updated 2 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆24Updated last month
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆21Updated 3 months ago
• tyang816 / ProtREM
  Augmenting zero-shot mutant prediction by retrieval-based logits fusion.
  ☆20Updated last week
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆20Updated 4 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆46Updated 5 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆45Updated 3 months ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆31Updated 6 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆25Updated last year
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆62Updated 4 months ago
• danny305 / StabilityOracle
  ☆21Updated 5 months ago
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆20Updated 11 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆24Updated 7 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆25Updated 5 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆33Updated 2 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆26Updated 3 weeks ago
• bwicky / oligomer_hallucination
  ☆35Updated 11 months ago
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆14Updated last year
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆26Updated 9 months ago
• coreyhowe999 / RSO
  ☆17Updated 3 weeks ago
• Kuhlman-Lab / evopro
  ☆70Updated 7 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆25Updated 2 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆48Updated 4 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆18Updated 10 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆23Updated 3 weeks ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆32Updated 11 months ago
• lehner-lab / doubledeepms
  Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…
  ☆19Updated last year