Alternatives and similar repositories for cdna-display-proteolysis-pipeline

Users that are interested in cdna-display-proteolysis-pipeline are comparing it to the libraries listed below

• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆31Updated last year
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆36Updated last month
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 5 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆70Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆47Updated 6 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• AbSciBio / igdesign
  ☆47Updated 10 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆29Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆54Updated 3 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 4 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆46Updated last month
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆40Updated 4 years ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆60Updated last month
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆54Updated 7 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆57Updated 5 months ago
• lcbc-epfl / metal-site-prediction
  ☆41Updated last year
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆60Updated 2 years ago
• Kuhlman-Lab / evopro
  ☆90Updated last month
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated 3 weeks ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆31Updated last year
• liuyf020419 / SCUBA-D
  ☆62Updated last year
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆47Updated last week
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 7 months ago
• lehner-lab / doubledeepms
  Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…
  ☆21Updated 2 years ago
• Lailabcode / DeepSCM
  A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…
  ☆28Updated 3 years ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆44Updated last year
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆24Updated 5 months ago