wells-wood-research / alphafold2-multiprocessing
Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
☆23Updated 3 years ago
Alternatives and similar repositories for alphafold2-multiprocessing:
Users that are interested in alphafold2-multiprocessing are comparing it to the libraries listed below
- ☆9Updated last year
- ☆19Updated last year
- This repo contains the collection of codes to find designer interfacial mutations☆17Updated last year
- ML toolset for creating TED: The Encyclopedia of Domains☆17Updated last month
- ☆28Updated 11 months ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆23Updated last year
- Python package to atom map, correct and suggest enzymatic reactions☆37Updated last year
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆28Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆41Updated 2 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 6 years ago
- Python package to manage protein structures and their annotations☆42Updated last year
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆26Updated 8 months ago
- development repository for PyInteraph2☆22Updated 3 weeks ago
- ☆31Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 3 months ago
- Printing text using protein structures☆13Updated 3 years ago
- Some scripts that I keep using over and over.☆18Updated 3 months ago
- ☆29Updated 4 years ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆29Updated last year
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.☆17Updated 9 years ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago
- dMaSIF implementation for google colab☆32Updated 2 years ago
- Files and utilities for protein-emoji☆21Updated 2 years ago
- ☆34Updated 3 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Machine learning prediction of enzyme optimum pH☆29Updated last month
- ☆26Updated 10 months ago