Alternatives and similar repositories for alphafold2-multiprocessing

Users that are interested in alphafold2-multiprocessing are comparing it to the libraries listed below

• KULL-Centre / pdbwords
  Printing text using protein structures
  ☆14Updated 4 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆36Updated 4 years ago
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆24Updated 6 months ago
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆26Updated last year
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆56Updated 10 months ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 3 years ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆21Updated 2 years ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆41Updated 2 years ago
• pagnani / PlmDCA.jl
  Pseudo Likelihood Maximization for protein in Julia
  ☆51Updated 6 months ago
• CSB-KaracaLab / prot-on
  This repo contains the collection of codes to find designer interfacial mutations
  ☆17Updated 2 years ago
• ibivu / hydrophobic_patches
  ☆11Updated 2 years ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆58Updated 3 months ago
• ur-whitelab / peptide-dashboard
  Web cards/apps describing peptides
  ☆30Updated 2 years ago
• UCLOrengoGroup / cath-alphaflow
  ☆23Updated 3 weeks ago
• Degiacomi-Lab / biobox
  a toolbox for the manipulation, modelling and analysis of molecular structures
  ☆27Updated 2 weeks ago
• normandavey / ProcessedAlphafold
  ☆31Updated 4 years ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆43Updated 2 years ago
• soedinglab / pdbx
  pdbx is a parser module in python for structures of the protein data bank in the mmcif format
  ☆30Updated last year
• sami-chaaban / alphascreen
  Screen interactions with AlphaFold Multimer
  ☆12Updated 9 months ago
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆31Updated 2 years ago
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆39Updated last year
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆45Updated last year
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆34Updated 2 years ago
• CMD-Oxford / MichelaNGLo
  A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site
  ☆12Updated 4 years ago
• BioComputingUP / AlphaFold-disorder
  Predict disorder and disorder binding from AlphaFold structures
  ☆18Updated last year
• tekpinar / correlationplus
  A Python package to calculate, visualize and analyze correlation maps of proteins.
  ☆41Updated 3 months ago
• ElwynWang / DeepFragLib
  ☆29Updated 5 years ago
• SNU-CSSB / RF2-Lite
  ☆31Updated last year
• BobbyLangan / DeNovoDesignofBioactiveProteinSwitches
  Code used in the manuscript for De Novo Design of Bioactive Protein Switches
  ☆16Updated 6 years ago
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆38Updated 3 months ago