BioinfoMachineLearning / TransFew
Transformer for protein function prediction (version 2)
☆12Updated 3 months ago
Alternatives and similar repositories for TransFew:
Users that are interested in TransFew are comparing it to the libraries listed below
- ML toolset for creating TED: The Encyclopedia of Domains☆16Updated 2 weeks ago
- MEGADOCK on Google Colaboratory☆15Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- Fast protein domain structure embedding+search tool☆15Updated 2 weeks ago
- ☆34Updated 6 months ago
- ☆22Updated last year
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆19Updated 2 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆16Updated 2 years ago
- ☆8Updated last year
- ☆9Updated 2 years ago
- ☆20Updated 4 months ago
- Machine learning prediction of enzyme optimum pH☆29Updated 3 weeks ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- KDS software for Kinase Drug Selectivity☆11Updated last year
- Protein Structure Archiver☆12Updated 9 months ago
- Structure-Informed Protein Language Model☆31Updated last year
- ☆13Updated 3 months ago
- A domain parser for Alphafold models☆34Updated last year
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year
- ☆25Updated 10 months ago
- ☆9Updated last year
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆31Updated last month
- A PyMOL plugin with accompanying Docker image for kinase inhibitor binding and affinity prediction☆9Updated 9 months ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆33Updated 3 weeks ago
- Ultra-fast in-silico structure mutation☆32Updated 2 years ago
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆15Updated 2 years ago
- Geometry-aware protein binding site predictor☆18Updated 7 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆23Updated 3 weeks ago
- Code for deep learning guided design of dynamic proteins☆17Updated 8 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆36Updated 6 months ago