a-velt / Mfuzz_RNAseq
A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
☆18Updated 5 years ago
Alternatives and similar repositories for Mfuzz_RNAseq:
Users that are interested in Mfuzz_RNAseq are comparing it to the libraries listed below
- ☆17Updated 8 months ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- ☆23Updated 3 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- GENome Organisation Visual Analytics☆15Updated 3 years ago
- ☆10Updated 5 months ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆23Updated 2 years ago
- ☆21Updated 3 weeks ago
- Transcriptome-wide network☆16Updated 5 years ago
- Analysis pipeline for our circSC manuscript☆13Updated 2 years ago
- Dynamic Analysis of Alternative Polyadenylation from single-cell RNA-seq (scDaPars)☆14Updated 3 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 4 years ago
- ☆17Updated 4 years ago
- ☆18Updated 8 months ago
- RNA-seq analysis scripts☆15Updated 2 years ago
- Workflow for Sequenza, cellularity and ploidy☆18Updated this week
- ☆17Updated 2 years ago
- Peak calling for 4C data☆12Updated 6 years ago
- ☆12Updated 4 years ago
- ☆28Updated 3 months ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 years ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆18Updated last year
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 3 months ago
- ☆11Updated last year
- ☆15Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆24Updated 8 months ago
- ☆11Updated 2 years ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- Main repository for Drews et al. (Nature, 2022)☆39Updated last year