a-velt / Mfuzz_RNAseqLinks
A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
☆23Updated 6 years ago
Alternatives and similar repositories for Mfuzz_RNAseq
Users that are interested in Mfuzz_RNAseq are comparing it to the libraries listed below
Sorting:
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- ☆23Updated 4 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- Extract Sequence from Genome According to Annotation File☆39Updated 9 months ago
- ☆17Updated last year
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.☆10Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago
- Micro DNA identification☆23Updated 4 years ago
- ☆23Updated 10 months ago
- ☆20Updated 2 years ago
- ☆11Updated 5 years ago
- ☆26Updated 2 years ago
- Long read to rMATS☆32Updated 2 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆27Updated 2 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 6 years ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 10 months ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 2 months ago
- ☆12Updated 8 months ago
- Peak caller for CUT&TAG data☆30Updated 3 years ago
- ☆19Updated 5 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆20Updated last year
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆17Updated 5 months ago
- ☆12Updated 5 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- Workflow for Sequenza, cellularity and ploidy☆25Updated 4 months ago
- ☆15Updated 2 years ago
- Scripts used for the ACT paper☆12Updated 4 years ago