linyuiz / zgtools
zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.
☆25Updated this week
Related projects ⓘ
Alternatives and complementary repositories for zgtools
- ☆21Updated 2 years ago
- Resistify is a command line program that identifies and classifies NLRs from protein sequences☆26Updated this week
- ☆29Updated last week
- ☆20Updated 3 months ago
- ☆28Updated 2 years ago
- ☆36Updated last year
- This is a method to find telomeres and centromeres in plants.☆37Updated last year
- ☆28Updated 2 months ago
- ☆22Updated 2 months ago
- Centromics: visualing centromeres with multiple omics data☆17Updated 10 months ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆17Updated 5 months ago
- scripts☆15Updated 6 years ago
- A tool for quick and accurate calculation of syntenic diversity.☆29Updated 2 months ago
- ☆14Updated 10 months ago
- A genome assembly assessment pipeline.☆36Updated last year
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 5 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆35Updated 4 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆21Updated 3 months ago
- An efficient assembly tool for plant mitochondrial genome☆28Updated 5 months ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆36Updated 4 months ago
- ☆24Updated 3 years ago
- HiCAT new project☆27Updated 11 months ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 weeks ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆33Updated 2 months ago
- A tool for performing collinearity-incorporating homology inference☆27Updated last year
- Genome Annotation Pipeline☆32Updated 3 months ago
- ☆15Updated 9 months ago
- The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding☆14Updated 10 months ago
- ☆14Updated 3 years ago
- Genome haplotype assembly and assessment method☆11Updated 11 months ago