Scripts that used in our chicken T2T manuscript.
☆22Jan 14, 2026Updated 2 months ago
Alternatives and similar repositories for chicken-T2T
Users that are interested in chicken-T2T are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reconstruction of ancestral genome maps☆16Mar 29, 2018Updated 7 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Jun 10, 2025Updated 9 months ago
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 3 months ago
- Pan-3D genome analysis of soybean Hi-C data☆12Mar 6, 2023Updated 3 years ago
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- Figures for the CHM13 T2T SD paper.☆11Sep 12, 2021Updated 4 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆29Jan 17, 2024Updated 2 years ago
- ☆17Jan 14, 2026Updated 2 months ago
- ☆28Oct 20, 2023Updated 2 years ago
- Scripts used to perform analyses in Rice et al. (2023)☆16Dec 28, 2023Updated 2 years ago
- Here, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideu…☆13Feb 18, 2024Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆31Nov 25, 2019Updated 6 years ago
- Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.☆26Feb 23, 2022Updated 4 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆27Jan 18, 2023Updated 3 years ago
- ☆12Sep 6, 2019Updated 6 years ago
- A genome assembly assessment pipeline.☆38Nov 20, 2023Updated 2 years ago
- HiCAT new project☆34May 18, 2025Updated 10 months ago
- ☆11Sep 28, 2021Updated 4 years ago
- ☆30Mar 4, 2022Updated 4 years ago
- ☆13Apr 7, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆16Jul 25, 2021Updated 4 years ago
- Some useful bioinformatics pipelines for genomics analysis☆14May 25, 2021Updated 4 years ago
- ☆29Apr 16, 2023Updated 2 years ago
- Useful bioinformatic scripts☆60Feb 23, 2026Updated last month
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- Calculate the dn/ds (also pn and ps) value of cds☆14Jul 11, 2020Updated 5 years ago
- 生物信息学入门的系列课程，包括Linux, shell, Python 编程，建库测序，基因组学，以及系统进化，常用软件使用等内容。☆23Sep 16, 2021Updated 4 years ago
- Centromics: visualing centromeres with multiple omics data☆21Jan 18, 2024Updated 2 years ago
- ☆35Aug 8, 2025Updated 7 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆17Nov 19, 2025Updated 4 months ago
- The cattle Genotype-Tissue Expression atlas v1☆28Mar 14, 2023Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 7 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- ☆42May 19, 2025Updated 10 months ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆68Oct 23, 2025Updated 5 months ago