Alternatives and similar repositories for chicken-T2T:

Users that are interested in chicken-T2T are comparing it to the libraries listed below

• JM-SONG / GenomeSyn
  ☆23Updated 3 years ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 3 years ago
• LAILAB-CAU / update-Mo17
  ☆23Updated last year
• Immortal2333 / Haplotype_Genome_Assembly
  Genome haplotype assembly and assessment method
  ☆12Updated last year
• Zhanmengtao / bin
  scripts
  ☆15Updated 6 years ago
• tangerzhang / calc_switchErr
  ☆27Updated 3 years ago
• yiliao1022 / Pepper3Dgenome
  ☆15Updated 2 years ago
• unavailable-2374 / Genome-Wide-Annotation-Pipeline
  This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.
  ☆22Updated last year
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆22Updated 2 weeks ago
• yilinZhang-bio / Watermelon-pangenome
  ☆21Updated last year
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆27Updated last month
• chenym1 / genetribe
  A tool for performing collinearity-incorporating homology inference
  ☆29Updated last year
• ChenHuaLab / CEGA
  Inferring natural selection by comparative population genomic analysis across species
  ☆23Updated last year
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated 10 months ago
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 7 months ago
• JiaoLab2021 / EVG
  A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads
  ☆37Updated 8 months ago
• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆23Updated 4 years ago
• qiao-xin / Scripts_for_GB
  The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".
  ☆28Updated 4 years ago
• jkimlab / DESCHRAMBLER
  ☆22Updated last year
• comery / Data-Visulization
  issues for semina "Data Visulization"
  ☆13Updated last year
• Wendellab / CisTransRegulation
  Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum
  ☆16Updated last year
• thamala / PBScan
  Selection outlier scan with population branch statistic
  ☆13Updated last year
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆38Updated 6 months ago
• lardo / khaper
  ☆27Updated 2 years ago
• xiekunwhy / bsa
  Bulked-Segregant Analysis using vcf file with or without parents
  ☆25Updated 3 months ago
• SexGenomicsToolkit / PSASS
  Pooled Sequencing Analysis for Sex Signal
  ☆11Updated 3 years ago
• baozg / phased-assembly-check
  ☆29Updated 2 months ago
• simon19891216 / CentIER
  ☆29Updated 6 months ago