GuyTeichman / RNAlysisLinks
Analyze your RNA sequencing data without writing a single line of code
☆140Updated 7 months ago
Alternatives and similar repositories for RNAlysis
Users that are interested in RNAlysis are comparing it to the libraries listed below
Sorting:
- Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…☆167Updated last month
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆107Updated 7 months ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- Tool for plotting sequencing data along genomic coordinates.☆335Updated last month
- minimal example implementations for bioinformatics workflow managers☆280Updated 4 years ago
- Reference-guided transcript discovery and quantification for long read RNA-Seq data☆223Updated this week
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆159Updated 3 weeks ago
- Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed in…☆123Updated 3 months ago
- Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.☆232Updated 2 months ago
- A collection of scripts and notes related to genomics and bioinformatics☆218Updated last month
- Download FASTQ files from SRA or ENA repositories.☆363Updated last week
- Melbourne Bioinformatics documentation in markdown format☆120Updated last week
- machine-readable file format for genomic library sequence and structure☆126Updated 4 months ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆88Updated this week
- Check strandedness of RNA-Seq fastq files☆128Updated 3 years ago
- Normalization of RNA-seq gene expression☆104Updated 6 months ago
- A small-RNA sequencing analysis pipeline☆98Updated 2 weeks ago
- coding exercise using TCGA immune infiltration data☆46Updated last year
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆251Updated this week
- Short lessons from FAS Informatics coffee hour☆155Updated 2 years ago
- Introduction to bulk RNA-seq☆134Updated 8 months ago
- Step-by-step analysis pipeline for RNA-seq data☆161Updated 2 years ago
- 🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.☆201Updated 5 years ago
- Discovering known and novel miRNAs from small RNA sequencing data☆158Updated last month
- Bioinformatics and genomics resources☆82Updated 2 weeks ago
- Example genomics data for tool developers☆117Updated last year
- Porting DESeq2 into python via rpy2☆67Updated 2 years ago
- ☆83Updated 2 weeks ago
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆119Updated 3 years ago
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/☆101Updated 3 years ago