MaayanLab / Zika-RNAseq-Pipeline
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study
☆102Updated 2 years ago
Related projects: ⓘ
- Course material in notebook format for learning about single cell bioinformatics methods☆99Updated 8 years ago
- ISCB DC Area Regional Student Group - Summer 2016 Workshop☆47Updated 8 years ago
- New user☆41Updated 3 years ago
- RNA-Seq analysis workflow☆103Updated 3 years ago
- A SingleCell RNASeq pre-processing snakemake workflow☆147Updated last year
- ENCODE Uniform processing pipeline for ChIP-seq☆120Updated 4 years ago
- website for the rnaseq course☆91Updated 3 weeks ago
- Code for biostar tutorials - mostly R and Perl☆49Updated last month
- ☆67Updated 2 years ago
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆106Updated 5 years ago
- Transcript quantification import for modular pipelines☆134Updated 5 months ago
- A short tutorial on how to use RSEM☆132Updated 4 years ago
- R data package for annotating/converting Gene IDs☆160Updated last year
- Batch effects and the effective design of single-cell gene expression studies☆97Updated 5 years ago
- Issue tracker for the Biostar Handbook☆57Updated 2 years ago
- R package for analyzing single-cell RNA-seq data☆172Updated 6 months ago
- RNA-seq data analysis practical☆59Updated 10 years ago
- Materials for Genomics Data Science: Introduction to Bioconductor☆90Updated 2 months ago
- Melbourne Bioinformatics documentation in markdown format☆99Updated this week
- Statistical Analysis of RNA-Seq Tools☆103Updated last year
- GWAS Pipeline for H3Africa☆104Updated this week
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆76Updated 3 weeks ago
- Tutorials on accessing public reference and genomic data☆29Updated 2 years ago
- A collection of scripts and notes related to genomics and bioinformatics☆198Updated 3 weeks ago
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆116Updated 4 years ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆90Updated last week
- STAR based ENCODE Long RNA-Seq processing pipeline☆92Updated 3 years ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆296Updated 8 months ago
- ☆60Updated 4 years ago
- ATAC-seq and DNase-seq processing pipeline☆160Updated 2 years ago