Alternatives and similar repositories for GUESSmyLT:

Users that are interested in GUESSmyLT are comparing it to the libraries listed below

• EI-CoreBioinformatics / portcullis
  Splice junction analysis and filtering from BAM files
  ☆39Updated 2 years ago
• bartongroup / RATS
  Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.
  ☆32Updated 2 years ago
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆42Updated this week
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆36Updated this week
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆24Updated 4 months ago
• AndreasHeger / gat
  Genomic Association Tester
  ☆30Updated last year
• nf-core / lncpipe
  UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets
  ☆34Updated 10 months ago
• saketkc / rna-seq-snakemake
  Snakemake based pipeline for RNA-Seq analysis
  ☆31Updated 5 years ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆20Updated 7 years ago
• tao-bioinfo / gff3sort
  GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
  ☆48Updated 4 years ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated this week
• ChristopherWilks / megadepth
  BigWig and BAM utilities
  ☆95Updated 11 months ago
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• Clinical-Genomics / fusion-report
  Tool for parsing outputs from fusion detection tools. Part of a nf-core/rnafusion pipeline. Checkout a live demo at https://matq007.githu…
  ☆26Updated 3 months ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆23Updated 3 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆38Updated 3 weeks ago
• lfresard / blood_rnaseq_rare_disease_paper
  ☆29Updated 5 years ago
• crazyhottommy / pyflow-RNAseq
  RNAseq pipeline based on snakemake
  ☆25Updated 2 years ago
• js2264 / tidyCoverage
  ☆21Updated 6 months ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆32Updated 2 weeks ago
• hbctraining / Intro-to-variant-analysis
  ☆30Updated last month
• mritchielab / long_read_tools
  A catalogue of available long read sequencing data analysis tools
  ☆76Updated this week
• stephenturner / adapters
  Adapters for trimming
  ☆30Updated 6 years ago
• costasilvati / consexpression
  Tool for RNA-Seq analysis.
  ☆38Updated 2 years ago
• pachterlab / splitcode
  Flexible and efficient parsing, interpreting and editing of sequencing reads
  ☆42Updated 2 months ago
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆31Updated 2 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆49Updated 5 months ago
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆16Updated 2 years ago
• zavolanlab / zarp
  The Zavolab Automated RNA-seq Pipeline
  ☆35Updated 2 months ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆26Updated 5 years ago