HudsonAlpha / CSL_public_benchmark
Location of public benchmarking; primarily final results
☆18Updated last month
Alternatives and similar repositories for CSL_public_benchmark:
Users that are interested in CSL_public_benchmark are comparing it to the libraries listed below
- ☆16Updated 2 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆25Updated this week
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated this week
- Structural variant (SV) analysis tools☆35Updated 8 months ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆32Updated last year
- Sample Contamination Estimate from VCF☆19Updated 4 months ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆27Updated 9 months ago
- ☆39Updated 6 months ago
- Automated Detection and Qualification of Differential Methylation☆12Updated last year
- Working space for the GIAB TR benchmarking project☆21Updated 5 months ago
- Model files for Sentieon variant callers☆14Updated last month
- Structural variant VCF annotation, duplicate removal and comparison☆30Updated 3 weeks ago
- Immuological gene typing and annotation for genome assembly☆34Updated last week
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆28Updated 8 months ago
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago
- Structural variant benchmark☆17Updated 2 weeks ago
- ☆21Updated last week
- ☆14Updated last week
- ☆29Updated 2 years ago
- Structural Variation breakpoint discovery via adaptive learning☆15Updated last year
- A new tool to infer sex from massively parallel sequencing data.☆16Updated 9 months ago
- Tumour-only somatic mutation calling using long reads☆26Updated 4 months ago
- ☆21Updated 3 months ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 4 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Population-wide Deletion Calling☆35Updated 6 months ago
- ☆20Updated 3 months ago
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆18Updated last year
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆26Updated 7 months ago
- Code for phasing SVs with SNPs☆52Updated 4 years ago