Analysis pipelines for QTL discovery and GWAS signals interpretation
☆13Sep 3, 2024Updated 2 years ago
Alternatives and similar repositories for population-compare-pipeline
Users that are interested in population-compare-pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Apr 25, 2026Updated 6 months ago
- Repository☆10Oct 23, 2024Updated 2 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 3 years ago
- Scripts for next generation sequencing analyses☆15Aug 11, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PredictDB Pipeline for GTEx v7 data☆18Nov 9, 2022Updated 3 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated 2 years ago
- ☆16Apr 20, 2021Updated 5 years ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Oct 15, 2026Updated 3 weeks ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆14Mar 14, 2019Updated 7 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- SMTpred is a program which combines SNP effects or individual scores from multiple traits according to their sample size, SNP-heritabilit…☆16May 25, 2017Updated 9 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- ☆10Jul 19, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 5 years ago
- An introductory workshop to GWAS analysis using PLINK and R☆15Sep 15, 2015Updated 11 years ago
- ☆12Jun 16, 2023Updated 3 years ago
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 11 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated last year
- Fast manhattenplots using ggplot2☆14Apr 24, 2026Updated 6 months ago
- A collection of commonly used resources for complex trait genetics.☆48Jul 9, 2026Updated 3 months ago
- The cattle Genotype-Tissue Expression atlas v1☆33Mar 14, 2023Updated 3 years ago
- Brain-related -omics data☆28Mar 21, 2026Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆26Oct 27, 2017Updated 9 years ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Oct 2, 2026Updated last month
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆39Jul 5, 2025Updated last year
- ☆20Oct 4, 2023Updated 3 years ago
- crussmap is a faster tool to convert genome coordinates between difference reference assemblies.☆23May 4, 2023Updated 3 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆38Sep 26, 2024Updated 2 years ago
- Example for TWAS☆12Jan 23, 2022Updated 4 years ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 3 years ago
- ☆11Apr 4, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 4 years ago
- ggplot2-based Manhattan plot☆13Oct 18, 2022Updated 4 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- PriOritizing the Candidate genes by incorporating information of Knowledge-based gene sets, Effects of variants, GWAS and TWAS☆11May 14, 2021Updated 5 years ago
- Cross-population analysis using GWAS summary statistics☆21Jun 25, 2024Updated 2 years ago
- ☆13Jan 30, 2025Updated last year