Rapid discovery of reciprocal best blast pairs.
☆10Nov 9, 2024Updated last year
Alternatives and similar repositories for blast-besties
Users that are interested in blast-besties are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Feb 10, 2025Updated last year
- Prokaryotic Pangenome Analysis☆24Dec 3, 2021Updated 4 years ago
- Finding regions of similarity between plasmids☆17Nov 2, 2022Updated 3 years ago
- A Nextflow pipeline for viral genomics (Influenza/RSV) supporting Illumina and Nanopore sequencing of clinical and wastewater samples.☆10Jun 9, 2026Updated last week
- 3’ Tag RNA-seq pipeline (Work in progress)☆10Mar 14, 2021Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- NCBI Pathogen Detection Portal toolkit☆11Sep 6, 2023Updated 2 years ago
- The MafFilter genome alignment processor☆19Apr 10, 2026Updated 2 months ago
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆20Apr 10, 2026Updated 2 months ago
- Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing libra…☆15Feb 27, 2024Updated 2 years ago
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆13May 22, 2026Updated 3 weeks ago
- Metagenomics-focused BAM file manipulation☆15Jul 8, 2019Updated 6 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Feb 17, 2026Updated 4 months ago
- tool to determine optimal refrerence genome given a set of fasta files☆15May 18, 2023Updated 3 years ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆10Dec 7, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A software for gap filling in genome assemblies☆10Aug 12, 2022Updated 3 years ago
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10May 2, 2026Updated last month
- Create a tree using Mash distances☆188Oct 24, 2023Updated 2 years ago
- Colinear block visualisation tool☆31Jan 17, 2024Updated 2 years ago
- Genome size estimation from long read overlaps☆91May 1, 2026Updated last month
- A tool to detect acquired AMR genes directly from long read sequencing data.☆28Jan 31, 2026Updated 4 months ago
- ☆17Mar 2, 2024Updated 2 years ago
- µbinfie blog☆19Jul 21, 2025Updated 10 months ago
- emm Automatic Isolate Labeller☆14Mar 25, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆25Apr 13, 2020Updated 6 years ago
- Mandel Lab Protocols☆12Mar 3, 2026Updated 3 months ago
- A plant organellar Graphical Fragment Assembly toolkit☆16Sep 10, 2025Updated 9 months ago
- A k-mer-based maximum likelihood method for estimating distances of reads to genomes and phylogenetic placement.☆24May 16, 2026Updated last month
- A Nextflow pipeline for running synteny analysis.☆16Jun 7, 2026Updated last week
- FunctionaL Omics Processing platform☆13Jul 25, 2024Updated last year
- ☆15Apr 19, 2018Updated 8 years ago
- Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads☆65Jan 22, 2026Updated 4 months ago
- Rapid & standardized genome annotation using protein structural information☆68Jun 12, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Nextflow DSL2 pipeline to align short and long reads to genome assembly. This workflow is part of the Tree of Life production suite.☆17Jun 4, 2026Updated 2 weeks ago
- BEAV: Bacterial Element Annotation reVamped☆77Aug 21, 2025Updated 9 months ago
- ☆18Jun 11, 2024Updated 2 years ago
- The Whole Genome Sequencing Coverage Plot (wgscovplot) is a tool to generate HTML Interactive Coverage Plot given coverage depth informat…☆19May 3, 2024Updated 2 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Mar 5, 2018Updated 8 years ago
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆43Dec 11, 2020Updated 5 years ago
- Split k-mer analysis – version 2☆104Apr 9, 2026Updated 2 months ago