Gabaldonlab / perSVadeLinks
perSVade: personalized Structural Variation detection
☆40Updated last month
Alternatives and similar repositories for perSVade
Users that are interested in perSVade are comparing it to the libraries listed below
Sorting:
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆34Updated last year
- Error correction of ONT transcript reads☆58Updated 2 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆58Updated last month
- methods for orphan gene prediction paper optimization☆25Updated 3 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- A Nextflow pipeline for evaluating assembly quality☆37Updated last week
- Materials for Spring 2021 Applied Genomics Course☆53Updated 4 years ago
- ☆33Updated 4 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- A program for assessing the T2T genome continuity☆87Updated 2 weeks ago
- catalog for long-read sequencing tools☆32Updated 2 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 9 months ago
- MCHelper: An automatic tool to curate transposable element libraries☆42Updated 3 months ago
- A pipeline for isoseq☆23Updated 7 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 4 months ago
- ☆30Updated 4 years ago
- A local-haplotagging-based small and structural variant caller☆86Updated last week
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- ☆31Updated last year
- Computational Analysis of Gene Expression Evolution☆43Updated 2 months ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- read and analyse RepeatMasker output☆26Updated 2 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 7 months ago
- scripts for the project of seven thaliana genomes assembly☆41Updated 4 years ago
- Structural variant merging tool☆55Updated last year
- ☆66Updated last month
- ☆26Updated 8 months ago