PGP-UK / GenomeChroniclerLinks
☆13Updated 2 years ago
Alternatives and similar repositories for GenomeChronicler
Users that are interested in GenomeChronicler are comparing it to the libraries listed below
Sorting:
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Updated last year
- PopSTR - A Population based microsatellite genotyper☆33Updated 2 years ago
- Program for estimating admixture proportions and doing principal component analysis of a single NGS sample☆10Updated last year
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆15Updated 3 years ago
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆26Updated last year
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆16Updated 3 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago
- Location of public benchmarking; primarily final results☆18Updated 8 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated 2 weeks ago
- ☆34Updated 2 years ago
- ☆16Updated 9 months ago
- ☆23Updated 10 months ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 2 months ago
- ☆22Updated 3 months ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- Toolkit for calling and analyzing de novo STR mutations☆16Updated last year
- ☆20Updated last year
- Integrative analysis of complex structural variants☆22Updated 5 years ago
- Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation☆21Updated last month
- extract SV signal from a BAM☆11Updated 7 years ago
- Enabling differential allele-specific analysis☆11Updated 10 months ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆17Updated last year
- Two pass alignment for long reads☆22Updated 4 years ago
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆23Updated 2 years ago
- ☆15Updated last year
- Structural Variation breakpoint discovery via adaptive learning☆16Updated 2 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 7 months ago