statgen / pheweb-rg-pipelineView external linksLinks
Genetic correlation calculation pipeline via summary statistics for PheWeb
☆13Mar 22, 2019Updated 6 years ago
Alternatives and similar repositories for pheweb-rg-pipeline
Users that are interested in pheweb-rg-pipeline are comparing it to the libraries listed below
Sorting:
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 2 years ago
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Aug 20, 2025Updated 5 months ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- Interactive eQTL visualizations☆13Dec 12, 2022Updated 3 years ago
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- ☆18Dec 1, 2017Updated 8 years ago
- software package for integrative genetic association analysis☆35Jul 8, 2023Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Aug 28, 2020Updated 5 years ago
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 3 months ago
- ☆57Jan 16, 2025Updated last year
- Documentation on new GWAS Summary Statistics Standard☆23Nov 19, 2025Updated 2 months ago
- ☆21Nov 15, 2024Updated last year
- ☆18May 19, 2022Updated 3 years ago
- ☆38Jan 20, 2021Updated 5 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- R package for creating simulated summary statistics and testing MR methods☆12Sep 2, 2020Updated 5 years ago
- ☆24Jan 8, 2026Updated last month
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 6 months ago
- ActiveDriverDB☆12May 1, 2023Updated 2 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 7 months ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 2 weeks ago
- ☆13Nov 30, 2018Updated 7 years ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆191Sep 11, 2025Updated 5 months ago
- TWAS-pipeline☆24Feb 21, 2021Updated 4 years ago
- ☆22Oct 6, 2023Updated 2 years ago
- A Python package for fast operations on 1-dimensional genomic signal tracks☆23Apr 3, 2020Updated 5 years ago
- ☆26Oct 15, 2020Updated 5 years ago
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 2 years ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 2 years ago
- GENetic Effect-Size distribution Inference from Summary-level data☆15Sep 6, 2020Updated 5 years ago
- Clinical Variant Annotation Pipeline☆10Apr 21, 2020Updated 5 years ago
- ☆10Jul 2, 2024Updated last year
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Jul 2, 2025Updated 7 months ago
- R interface to megadepth: BigWig and BAM related utilities☆12Dec 12, 2024Updated last year
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- ☆30Oct 18, 2021Updated 4 years ago